RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 KRTAP10-11P60412 298 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 CD69Q07108 199 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 ALKBH1Q13686 389 aaKnown RBP13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 C17orf58Q2M2W7 97 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 SERPINA12Q8IW75 414 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 LINC00482Q8N8I6 264 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 OR56B4Q8NH76 319 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 CHPT1Q8WUD6 406 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 CPNE2Q96FN4 548 aaPredicted RBP13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 KIRREL1Q96J84 757 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 C4orf36Q96KX1 117 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 NR1H4Q96RI1 486 aaPredicted RBP13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 MCRIP2Q9BUT9 160 aaKnown RBP13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 PPIL3Q9H2H8 161 aaKnown RBP13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 MYRFQ9Y2G1 1151 aa13.83□□□□□ -0.2
PPP1CA-210ENST00000542876 OR4C45A6NMZ5 311 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 SERPINE3A8MV23 424 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 NUDT19A8MXV4 375 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 J3QR06 171 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 J3QRE1 110 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 SULT1B1O43704 296 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 SNRNP70P08621 437 aaKnown RBP13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 TMEM11P17152 192 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 EGFEM1PQ0D2K5 195 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 MADCAM1Q13477 382 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 DCTN2Q13561 401 aaKnown RBP13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 KISS1Q15726 138 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 PAN3Q58A45 887 aaKnown RBP13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 RNF144BQ7Z419 303 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 ZNF329Q86UD4 541 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 MRPL41Q8IXM3 137 aaKnown RBP13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 OR51T1Q8NGJ9 327 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 PELI1Q96FA3 418 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 CALYQ9NYX4 217 aa13.82□□□□□ -0.2
PPP1CA-210ENST00000542876 NBEAL2Q6ZNJ1 2754 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 MAGEB3O15480 346 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 SLC6A1P30531 599 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 RAB7AP51149 207 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 SNRPGP62308 76 aaKnown RBP13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 RPL23AP62750 156 aaKnown RBP13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 SLC35B1P78383 322 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 CDK5R1Q15078 307 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 SLC25A30Q5SVS4 291 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 ZNF691Q5VV52 312 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 UNQ9370/PRO34162Q6UXP9 181 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 DRAM1Q8N682 238 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 HAVCR2Q8TDQ0 301 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 NCOR1P1Q9H4R4 102 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 ZFP57Q9NU63 452 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 IDI2-AS1Q9NZ38 188 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 ZMAT5Q9UDW3 170 aaKnown RBP13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 KIF25Q9UIL4 384 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 KIAA2026Q5HYC2 2103 aa13.81□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A18PA6NE21 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A16PA6NEW6 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A20PA6NIJ5 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A9PA6NNJ1 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A12PA8MX19 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A5PA8MXJ8 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FGF16O43320 207 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 CIB2O75838 187 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 ATP5HO75947 161 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 IL1AP01583 271 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 IGHV3-7P01780 117 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A15PP0C7V4 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A13PP0C7W8 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A14PP0C7W9 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 FAM90A24PP0C7X0 464 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 ZP1P60852 638 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 HNF4GQ14541 408 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 LTC4SQ16873 150 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 C11orf87Q6NUJ2 197 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 OR2W3Q7Z3T1 314 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 OR8H3Q8N146 312 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 OR13A1Q8NGR1 328 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 OR10X1Q8NGY0 326 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 CNIH3Q8TBE1 160 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 TSEN15Q8WW01 171 aaKnown RBP13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 LEAP2Q969E1 77 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 GPER1Q99527 375 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 ALG8Q9BVK2 526 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 DHDHQ9UQ10 334 aa13.8□□□□□ -0.2
PPP1CA-210ENST00000542876 TMEM212A6NML5 194 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 CGB3P0DN86 165 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 CGB7P0DN87 165 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 KCNJ3P48549 501 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 THBS3P49746 956 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 GNG10P50151 68 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 MRPL28Q13084 256 aaKnown RBP13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 GALEQ14376 348 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 ZSCAN26Q16670 478 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 UTF1Q5T230 341 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 LPCAT4Q643R3 524 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 ELP2Q6IA86 826 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 SLC16A12Q6ZSM3 486 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 FOXRED2Q8IWF2 684 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 SYS1Q8N2H4 156 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 PARP16Q8N5Y8 322 aa13.79□□□□□ -0.2
PPP1CA-210ENST00000542876 COMMD1Q8N668 190 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms