RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 TNFRSF14Q92956 283 aa11.62□□□□□ -0.55
DDX11-221ENST00000542661 DPCDQ9BVM2 203 aaPredicted RBP11.62□□□□□ -0.55
DDX11-221ENST00000542661 SELENOIQ9C0D9 397 aa11.62□□□□□ -0.55
DDX11-221ENST00000542661 GAL3ST2Q9H3Q3 398 aa11.62□□□□□ -0.55
DDX11-221ENST00000542661 ZNF696Q9H7X3 374 aa11.62□□□□□ -0.55
DDX11-221ENST00000542661 OR6C3Q9NZP0 311 aa11.62□□□□□ -0.55
DDX11-221ENST00000542661 SSR3Q9UNL2 185 aa11.62□□□□□ -0.55
DDX11-221ENST00000542661 AK6Q9Y3D8 172 aaKnown RBP11.62□□□□□ -0.55
DDX11-221ENST00000542661 V9GY05 133 aa11.62□□□□□ -0.55
DDX11-221ENST00000542661 A0A1W2PP11 408 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 RNASEK-C17orf49H0YIS7 233 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 GLIPR1P48060 266 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 RBM39Q14498 530 aaKnown RBP11.61□□□□□ -0.55
DDX11-221ENST00000542661 ATXN7L3Q14CW9 347 aaPredicted RBP11.61□□□□□ -0.55
DDX11-221ENST00000542661 RAB11BQ15907 218 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 TAF9Q16594 264 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 C11orf42Q8N5U0 333 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 TPRX1Q8N7U7 411 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 SIGLECL1Q8N7X8 197 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 ZNF565Q8N9K5 539 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 SUMF2Q8NBJ7 301 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 TMEM104Q8NE00 496 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 ZFAND2BQ8WV99 257 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 TMEM158Q8WZ71 300 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 COQ2Q96H96 371 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 Q96M66 194 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 BANF2Q9H503 90 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 TAS2R3Q9NYW6 316 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 FAM96BQ9Y3D0 163 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 STAB1Q9NY15 2570 aa11.61□□□□□ -0.55
DDX11-221ENST00000542661 HSPB6O14558 160 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 NPFFO15130 113 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 GLAP06280 429 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 ARSBP15848 533 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 MIDNQ504T8 468 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 ATAD3CQ5T2N8 411 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 RUSC1-AS1Q66K80 236 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 C22orf42Q6IC83 251 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 PDZD9Q8IXQ8 264 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 OR13D1Q8NGV5 346 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 FAM46BQ96A09 425 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 SLC25A28Q96A46 364 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 GFI1Q99684 422 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 PRDM13Q9H4Q3 707 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 ZMAT3Q9HA38 289 aaKnown RBP11.6□□□□□ -0.55
DDX11-221ENST00000542661 RCC2Q9P258 522 aaKnown RBP11.6□□□□□ -0.55
DDX11-221ENST00000542661 KIAA2026Q5HYC2 2103 aa11.6□□□□□ -0.55
DDX11-221ENST00000542661 MEIKINA0A087WXM9 373 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 MCRIP1C9JLW8 97 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 TRIM77I1YAP6 450 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 VENTXO95231 258 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 MPIG6BO95866 241 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 IGHV1-8P0DP01 117 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 VSIG8P0DPA2 414 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 CD36P16671 472 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 FUT3P21217 361 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 RPS27AP62979 156 aaKnown RBP11.59□□□□□ -0.55
DDX11-221ENST00000542661 BAMBIQ13145 260 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 KLRD1Q13241 179 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 DEFB112Q30KQ8 113 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 TIMM50Q3ZCQ8 353 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 SLC35E4Q6ICL7 350 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 OR52W1Q6IF63 320 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 RAB12Q6IQ22 244 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 TCF23Q7RTU1 214 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 OR2W3Q7Z3T1 314 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 TPRA1Q86W33 373 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 NEK7Q8TDX7 302 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 TMEM59Q9BXS4 323 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 TXNL4BQ9NX01 149 aaKnown RBP11.59□□□□□ -0.55
DDX11-221ENST00000542661 KIF25Q9UIL4 384 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 SESN1Q9Y6P5 492 aa11.59□□□□□ -0.55
DDX11-221ENST00000542661 TMEM30CPA0ZSE6 113 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 MEX3AA1L020 520 aaKnown RBP11.58□□□□□ -0.56
DDX11-221ENST00000542661 MEIOCA2RUB1 952 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 TRIM64CA6NLI5 447 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 ZNF729A6NN14 1252 aaPredicted RBP11.58□□□□□ -0.56
DDX11-221ENST00000542661 TMEM14DPA8MWL7 114 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 CLDN34H7C241 214 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 PDCD6O75340 191 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 CA11O75493 328 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 CLPXO76031 633 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 FBP1P09467 338 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 RAB3BP20337 219 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 CFPP27918 469 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 DLX1P56177 255 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 QRFPP83859 136 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
DDX11-221ENST00000542661 P2RY14Q15391 338 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 RSBN1Q5VWQ0 802 aaPredicted RBP11.58□□□□□ -0.56
DDX11-221ENST00000542661 HCP5Q6MZN7 132 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 HEPN1Q6WQI6 88 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 ZNF782Q6ZMW2 699 aaPredicted RBP11.58□□□□□ -0.56
DDX11-221ENST00000542661 GDPGP1Q6ZNW5 385 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 PIP4P2Q8N4L2 257 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 KCTD7Q96MP8 289 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 ZNF48Q96MX3 618 aaPredicted RBP11.58□□□□□ -0.56
DDX11-221ENST00000542661 NEDD4LQ96PU5 975 aa11.58□□□□□ -0.56
DDX11-221ENST00000542661 URM1Q9BTM9 101 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms