RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ZNF732B4DXR9 585 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 TOR1AO14656 332 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 SIGLEC5O15389 551 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 MPPED1O15442 326 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 ST8SIA3O43173 380 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 PHF1O43189 567 aaPredicted RBP5.61□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF205O95201 554 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 TK1P04183 234 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 SEC11BP0C7V7 166 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 CTRB1P17538 263 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 LPAR6P43657 344 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF169Q14929 603 aaPredicted RBP5.61□□□□□ -1.51
PTPRO-208ENST00000542557 CTRB2Q6GPI1 263 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 BTNL8Q6UX41 500 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 MCEMP1Q8IX19 187 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 BOLLQ8N9W6 283 aaKnown RBP5.61□□□□□ -1.51
PTPRO-208ENST00000542557 C1orf162Q8NEQ5 155 aaPredicted RBP5.61□□□□□ -1.51
PTPRO-208ENST00000542557 OR11L1Q8NGX0 322 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 NANOS1Q8WY41 292 aaKnown RBP5.61□□□□□ -1.51
PTPRO-208ENST00000542557 OR5P3Q8WZ94 311 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 TMEM56Q96MV1 263 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 HIST1H2AAQ96QV6 131 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 SPIN2AQ99865 258 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 SPIN2BQ9BPZ2 258 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 NRIP2Q9BQI9 281 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 PKIBQ9C010 78 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 TMEM222Q9H0R3 208 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 RHOFQ9HBH0 211 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 MTCH1Q9NZJ7 389 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 IL17BQ9UHF5 180 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 TMEM56-RWDD3S4R434 201 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 MUC3AQ02505 3323 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 BORCS7-ASMTA0A0B4J1R7 106 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 FAM74A7A6NL05 159 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 ANKRD30BLA7E2S9 258 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 F8W036 122 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 GPR31O00270 319 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 H2AFB1P0C5Y9 115 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 CCL2P13500 99 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 IL32P24001 234 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 APLNRP35414 380 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 CLN3Q13286 438 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 SLC10A1Q14973 349 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 PDCD1Q15116 288 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 FAM74A3Q4VXF1 159 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 IGSF11Q5DX21 431 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 FAM122CQ6P4D5 195 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 FBXW12Q6X9E4 464 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 NUFIP2Q7Z417 695 aaKnown RBP5.61□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF573Q86YE8 665 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 SLC35G3Q8N808 338 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 OR1K1Q8NGR3 316 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 ERGIC1Q969X5 290 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 TP53RKQ96S44 253 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 GINS3Q9BRX5 216 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF552Q9H707 407 aaPredicted RBP5.61□□□□□ -1.51
PTPRO-208ENST00000542557 ATP23Q9Y6H3 246 aa5.61□□□□□ -1.51
PTPRO-208ENST00000542557 TRDCB7Z8K6 153 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 TNFSF15O95150 251 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 SNAPINO95295 136 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 IL18BPO95998 194 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 NGFP01138 241 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 CD5P06127 495 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 MUC1P15941 1255 aaPredicted RBP5.6□□□□□ -1.51
PTPRO-208ENST00000542557 GNRHRP30968 328 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 AKR1C2P52895 323 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 GNG3P63215 75 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 SRSF3P84103 164 aaKnown RBP5.6□□□□□ -1.51
PTPRO-208ENST00000542557 AKR1C1Q04828 323 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 IL24Q13007 206 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 GUCA2BQ16661 112 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 HES3Q5TGS1 186 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF880Q6PDB4 577 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 COMMD1Q8N668 190 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 HRH4Q9H3N8 390 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 C11orf1Q9H5F2 150 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 TREM1Q9NP99 234 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 FAM212BQ9NTI7 297 aaPredicted RBP5.6□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF175Q9Y473 711 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 ARHGAP21Q5T5U3 1957 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 FREM2Q5SZK8 3169 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 PIGBOS1A0A0B4J2F0 54 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 CLEC18AA5D8T8 446 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 NUPL2O15504 423 aaKnown RBP5.6□□□□□ -1.51
PTPRO-208ENST00000542557 FBXO24O75426 580 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 PF4P02776 101 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 WNT2P09544 360 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 WNT5AP41221 380 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 RAB5CP51148 216 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 SOX8P57073 446 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 HERPUD1Q15011 391 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 MAJINQ3KP22 176 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 FBXW9Q5XUX1 488 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 DHRS7BQ6IAN0 325 aaPredicted RBP5.6□□□□□ -1.51
PTPRO-208ENST00000542557 Q6ZRG5 221 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 ZNF565Q8N9K5 539 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 CLEC18CQ8NCF0 446 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 DMBX1Q8NFW5 382 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 OR52M1Q8NGK5 317 aa5.6□□□□□ -1.51
PTPRO-208ENST00000542557 BCL2L2Q92843 193 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms