RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CKS2P33552 79 aa13.64□□□□□ -0.23
HMGA2-210ENST00000541363 TM4SF20Q53R12 229 aa13.64□□□□□ -0.23
HMGA2-210ENST00000541363 C16orf92Q96LL3 132 aa13.64□□□□□ -0.23
HMGA2-210ENST00000541363 HIGD1AQ9Y241 93 aa13.64□□□□□ -0.23
HMGA2-210ENST00000541363 MRPS11P82912 194 aaKnown RBP13.63□□□□□ -0.23
HMGA2-210ENST00000541363 SSMEM1Q8WWF3 244 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 ZNF576Q9H609 170 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 WNT16Q9UBV4 365 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 PRNDQ9UKY0 176 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 FOXC1Q12948 553 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 PDCD6O75340 191 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 NPBWR2P48146 333 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 HYAL1Q12794 435 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 ANKRD34AQ69YU3 496 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 TCTN3Q6NUS6 607 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 ASCC3Q8N3C0 2202 aaKnown RBP13.63□□□□□ -0.23
HMGA2-210ENST00000541363 IGHV3-13P01766 116 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 IGHV3-7P01780 117 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 OR4D9Q8NGE8 314 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.63□□□□□ -0.23
HMGA2-210ENST00000541363 GPR3P46089 330 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 AKIP1Q9NQ31 210 aa13.63□□□□□ -0.23
HMGA2-210ENST00000541363 TMEM202A6NGA9 273 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 CD3EP07766 207 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 SLC25A1P53007 311 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 PTOV1Q86YD1 416 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 ASB5Q8WWX0 329 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 LRRC3BQ96PB8 259 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 GEMIN7Q9H840 131 aaKnown RBP13.62□□□□□ -0.23
HMGA2-210ENST00000541363 BCL2L10Q9HD36 194 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 HEATR1Q9H583 2144 aaKnown RBP13.62□□□□□ -0.23
HMGA2-210ENST00000541363 SBK3P0C264 359 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 AGERQ15109 404 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 TMEM78Q5T7P6 136 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 ORAI1Q96D31 301 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 C6orf106Q9H6K1 298 aaPredicted RBP13.62□□□□□ -0.23
HMGA2-210ENST00000541363 STARD10Q9Y365 291 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 H3BMH7 237 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 MRGPRGQ86SM5 289 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 FOXC2Q99958 501 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 DICER1Q9UPY3 1922 aaKnown RBP13.62□□□□□ -0.23
HMGA2-210ENST00000541363 CAPZBP47756 277 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 ZNF707Q96C28 371 aaPredicted RBP13.62□□□□□ -0.23
HMGA2-210ENST00000541363 LTBP3Q9NS15 1303 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 CCR5P51681 352 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 PRELID3AQ96N28 172 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 CTF1Q16619 201 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 ECSCRQ19T08 205 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 A0A1W2PRD5 423 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 A0A1W2PRF3 423 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 A0A1W2PRM7 423 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 SCAND1P57086 179 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 LOXL3P58215 753 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 POLR2GP62487 172 aaKnown RBP eCLIP13.62□□□□□ -0.23
HMGA2-210ENST00000541363 DPTQ07507 201 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 FAM27D1Q5T7N8 215 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 FAHD2BQ6P2I3 314 aaPredicted RBP13.62□□□□□ -0.23
HMGA2-210ENST00000541363 ISOC2Q96AB3 205 aa13.62□□□□□ -0.23
HMGA2-210ENST00000541363 TEPPQ6URK8 271 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 DDB2Q92466 427 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 METTL26Q96S19 204 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 MAP1LC3AQ9H492 121 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 ZNF665Q9H7R5 613 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 SAP30LQ9HAJ7 183 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 IL4P05112 153 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 FAHD1Q6P587 224 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 OR2V2Q96R30 315 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 CTAG2O75638 210 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 WNT1P04628 370 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 FAM3BP58499 235 aaPredicted RBP13.61□□□□□ -0.23
HMGA2-210ENST00000541363 GUCD1Q96NT3 240 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 MTFP1Q9UDX5 166 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 IGKV3D-15A0A087WSY6 115 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 IGKV3-15P01624 115 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 RAC3P60763 192 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 FOXQ1Q9C009 403 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 WNT9BO14905 357 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 DLX6P56179 175 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 LSM10Q969L4 123 aaKnown RBP13.61□□□□□ -0.23
HMGA2-210ENST00000541363 ARRDC1-AS1Q9H2J1 176 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 TRAV8-7A0A075B6U6 113 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 A0A1W2PR80 420 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 LNP1A1A4G5 178 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 UPK1AO00322 258 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 PMCHL1Q16048 86 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 P2RX4Q99571 388 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 ALKBH7Q9BT30 221 aaPredicted RBP13.61□□□□□ -0.23
HMGA2-210ENST00000541363 PAXXQ9BUH6 204 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 JKAMPQ9P055 326 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 LAMB4A4D0S4 1761 aa13.61□□□□□ -0.23
HMGA2-210ENST00000541363 TRBV23-1A0A0A0MS06 115 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 MMP9P14780 707 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 RAG2P55895 527 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 RHBDD2Q6NTF9 364 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 BEX4Q9NWD9 120 aaPredicted RBP13.6□□□□□ -0.23
HMGA2-210ENST00000541363 DNAJB12Q9NXW2 375 aaKnown RBP13.6□□□□□ -0.23
HMGA2-210ENST00000541363 HSF4Q9ULV5 492 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 PHLDA3Q9Y5J5 127 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms