RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 REEP6Q96HR9 211 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 FAM212BQ9NTI7 297 aaPredicted RBP14.75□□□□□ -0.05
SPIDR-227ENST00000541342 MGAQ8IWI9 3026 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 FAM186AA6NE01 2351 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 A0A096LPE4 126 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 A0A1W2PPZ6 126 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 A6NLC8 198 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 TSPAN15O95858 294 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 MTCP1P56278 107 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 GUK1Q16774 197 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 NRN1LQ496H8 165 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 CPEB3Q8NE35 698 aaKnown RBP14.75□□□□□ -0.05
SPIDR-227ENST00000541342 GALNT14Q96FL9 552 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 GINS3Q9BRX5 216 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 C20orf24Q9BUV8 137 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 NAA60Q9H7X0 242 aa14.75□□□□□ -0.05
SPIDR-227ENST00000541342 ZNF891A8MT65 544 aaPredicted RBP14.74□□□□□ -0.05
SPIDR-227ENST00000541342 E5RGE8 158 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 ZNHIT1O43257 154 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 PCBD1P61457 104 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 APH1AQ96BI3 265 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 C18orf12Q96KH6 178 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 NSG2Q9Y328 171 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 MED12LQ86YW9 2145 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 MED19A0JLT2 244 aaPredicted RBP14.74□□□□□ -0.05
SPIDR-227ENST00000541342 ZNF503-AS2A6NEH8 195 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 ZNF587BE7ETH6 402 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 SEC11BP0C7V7 166 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 ZNF616Q08AN1 781 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 SLC16A13Q7RTY0 426 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 RTN4IP1Q8WWV3 396 aaPredicted RBP14.74□□□□□ -0.05
SPIDR-227ENST00000541342 A0A1W2PPH5 198 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 SNRNP70P08621 437 aaKnown RBP14.74□□□□□ -0.05
SPIDR-227ENST00000541342 CHATP28329 748 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 MSI2Q96DH6 328 aaKnown RBP14.74□□□□□ -0.05
SPIDR-227ENST00000541342 EDARQ9UNE0 448 aa14.74□□□□□ -0.05
SPIDR-227ENST00000541342 BSNQ9UPA5 3926 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 CEACAM4O75871 244 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 LCATP04180 440 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 P2RY1P47900 373 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 EIF2S3LQ2VIR3 472 aaKnown RBP14.73□□□□□ -0.05
SPIDR-227ENST00000541342 RNF212Q495C1 297 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 NANPQ8TBE9 248 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 C10orf35Q96D05 121 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 SPACA1Q9HBV2 294 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 HSF4Q9ULV5 492 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 IGKV1-12A0A0C4DH73 117 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 FAM221AA4D161 298 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 H7C1Q1 480 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 IGKV1D-12P01611 117 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 ZNF728P0DKX0 622 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 NHLH2Q02577 135 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 PIGYQ3MUY2 71 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 PHLDA2Q53GA4 152 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 MCEMP1Q8IX19 187 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 LRTM2Q8N967 370 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 OR11L1Q8NGX0 322 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 SLC2A9Q9NRM0 540 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 NECAP2Q9NVZ3 263 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 PRSS50Q9UI38 385 aa14.73□□□□□ -0.05
SPIDR-227ENST00000541342 ZNF850A8MQ14 1090 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 C1orf196B1AJZ1 125 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 IGHG3P01860 377 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 MT-ND4LP03901 98 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 FXYD4P59646 89 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 HMGN3Q15651 99 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 OR10AD1Q8NGE0 317 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 C12orf49Q9H741 205 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 hCG_1809904A0A1W2PP81 198 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 FAM230AA0A1W2PPH8 454 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 A0A1W2PR64 198 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 A0A1W2PRV1 198 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 SLC22A20A6NK97 555 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 DOCK7Q96N67 2140 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 GEMIN2O14893 280 aaKnown RBP14.72□□□□□ -0.05
SPIDR-227ENST00000541342 HLA-HP01893 362 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 DAZAP2Q15038 168 aaPredicted RBP14.72□□□□□ -0.05
SPIDR-227ENST00000541342 OR5L1Q8NGL2 311 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 SEBOXQ9HB31 216 aaPredicted RBP14.72□□□□□ -0.05
SPIDR-227ENST00000541342 C19orf12Q9NSK7 152 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 RFNGQ9Y644 331 aa14.72□□□□□ -0.05
SPIDR-227ENST00000541342 LINC00587B1AMM8 73 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 GPR137BO60478 399 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 DTYMKP23919 212 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 RSU1Q15404 277 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 LIAT1Q6ZQX7 453 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 ZNF100Q8IYN0 542 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 METTL9Q9H1A3 318 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 TUBA4BQ9H853 241 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 TRAV17A0A0B4J275 112 aa14.71□□□□□ -0.05
SPIDR-227ENST00000541342 EIF5A2Q9GZV4 153 aaKnown RBP14.71□□□□□ -0.05
SPIDR-227ENST00000541342 PROB1E7EW31 1015 aa14.71□□□□□ -0.06
SPIDR-227ENST00000541342 EDN3P14138 238 aa14.71□□□□□ -0.06
SPIDR-227ENST00000541342 COMMD1Q8N668 190 aa14.71□□□□□ -0.06
SPIDR-227ENST00000541342 KDF1Q8NAX2 398 aaPredicted RBP14.71□□□□□ -0.06
SPIDR-227ENST00000541342 SPSB1Q96BD6 273 aa14.71□□□□□ -0.06
SPIDR-227ENST00000541342 PRDM14Q9GZV8 571 aa14.71□□□□□ -0.06
SPIDR-227ENST00000541342 RGCCQ9H4X1 137 aa14.71□□□□□ -0.06
SPIDR-227ENST00000541342 LUZP4Q9P127 313 aa14.71□□□□□ -0.06
SPIDR-227ENST00000541342 RCL1Q9Y2P8 373 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms