RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 MS4A18Q3C1V0 323 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 PLAC9Q5JTB6 97 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 ZNF506Q5JVG8 444 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 SP5Q6BEB4 398 aaPredicted RBP9.03□□□□□ -0.96
CHFR-219ENST00000541341 IGFL3Q6UXB1 125 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 LANCL3Q6ZV70 420 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 CPEB2Q7Z5Q1 589 aaKnown RBP9.03□□□□□ -0.96
CHFR-219ENST00000541341 ST6GALNAC3Q8NDV1 305 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 GJC3Q8NFK1 279 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 OR5L2Q8NGL0 311 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 HAS2Q92819 552 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 IL22RA2Q969J5 263 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 SPTSSAQ969W0 71 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 ARHGAP5-AS1Q96IT6 56 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 ZNF2Q9BSG1 426 aaPredicted RBP9.03□□□□□ -0.96
CHFR-219ENST00000541341 WWTR1Q9GZV5 400 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 ZNF700Q9H0M5 742 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 ZNF286AQ9HBT8 521 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 ZNF160Q9HCG1 818 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 HDGFL3Q9Y3E1 203 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 LSM5Q9Y4Y9 91 aaKnown RBP9.03□□□□□ -0.96
CHFR-219ENST00000541341 PDZD2O15018 2839 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 DOPEY1Q5JWR5 2465 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 FBN2P35556 2912 aa9.02□□□□□ -0.96
CHFR-219ENST00000541341 IGHV1-45A0A0A0MS14 117 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 SMCO3A2RU48 225 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A10PA6NDY2 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A18PA6NE21 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A16PA6NEW6 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A20PA6NIJ5 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A8PA6NJQ4 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A7PA6NKC0 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FOXI3A8MTJ6 420 aaPredicted RBP9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A22PA8MWA6 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A12PA8MX19 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A5PA8MXJ8 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A23PA8MXZ1 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 CLDN34H7C241 214 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 HRKO00198 91 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 DVL1O14640 695 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 AGPAT2O15120 278 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 SMAD9O15198 467 aaKnown RBP9.02□□□□□ -0.97
CHFR-219ENST00000541341 HMGB3O15347 200 aaKnown RBP9.02□□□□□ -0.97
CHFR-219ENST00000541341 SIGLEC5O15389 551 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 SOCS1O15524 211 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 PPIHO43447 177 aaKnown RBP9.02□□□□□ -0.97
CHFR-219ENST00000541341 DHRS3O75911 302 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 KNG1P01042 644 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 OR5AC1P0C628 307 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A15PP0C7V4 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A13PP0C7W8 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A14PP0C7W9 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FAM90A24PP0C7X0 464 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 OR5H8P0DN80 308 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 COX6A1P12074 109 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 FGF7P21781 194 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 GLRA1P23415 457 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 GLIPR1P48060 266 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 TMEM50BP56557 158 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 HERV-K104P61576 105 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 POU3F1Q03052 451 aaPredicted RBP9.02□□□□□ -0.97
CHFR-219ENST00000541341 KISS1Q15726 138 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 ZNF674Q2M3X9 581 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 AKIRIN2Q53H80 203 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 AKR1C8PQ5T2L2 129 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 MARCH3Q86UD3 253 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 OR5AS1Q8N127 324 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 ZNF283Q8N7M2 679 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 BEND2Q8NDZ0 799 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 NFAM1Q8NET5 270 aaPredicted RBP9.02□□□□□ -0.97
CHFR-219ENST00000541341 NOXO1Q8NFA2 376 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 OR51F2Q8NH61 342 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 OR51E1Q8TCB6 317 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 RNASEH2CQ8TDP1 164 aaKnown RBP9.02□□□□□ -0.97
CHFR-219ENST00000541341 CMBLQ96DG6 245 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 MUCL1Q96DR8 90 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 PGAM5Q96HS1 289 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 OXGR1Q96P68 337 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 GAL3ST4Q96RP7 486 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 MRPL13Q9BYD1 178 aaKnown RBP9.02□□□□□ -0.97
CHFR-219ENST00000541341 CELSR1Q9NYQ6 3014 aa9.02□□□□□ -0.97
CHFR-219ENST00000541341 IGLV3-32A0A0A0MS00 114 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 OR5H15A6NDH6 313 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 LIPT2A6NK58 231 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 OR5H1A6NKK0 313 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 ZNF850A8MQ14 1090 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 H3BQ15 152 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 H3BSH0 61 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 K7N7A8 449 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 ST8SIA5O15466 376 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 RAD51DO75771 328 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 DIRAS3O95661 229 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 GCGP01275 180 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 SLC25A6P12236 298 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 EDN3P14138 238 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 CEACAM6P40199 344 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 BIDP55957 195 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 PIGPP57054 158 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 TAS2R60P59551 318 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 RND3P61587 244 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms