RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 NEURL1O76050 574 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 BGLAPP02818 100 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 CISD3P0C7P0 127 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 GPR132Q9UNW8 380 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 NTN1O95631 604 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 CAMPP49913 170 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 METAP1P53582 386 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 TMEM50BP56557 158 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 BPIFA4PQ86YQ2 179 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 TREM2Q9NZC2 230 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 PSG11Q9UQ72 335 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 KIR3DL2P43630 455 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 B2MP61769 119 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 UBE2L3P68036 154 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 LINC00596Q86U02 117 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 TUBD1Q9UJT1 453 aa13.18□□□□□ -0.3
SMARCA4-207ENST00000541122 ISLRO14498 428 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 GLULP15104 373 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 TIMD4Q96H15 378 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 CHST5Q9GZS9 411 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 SCN1AP35498 2009 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 SKP2Q13309 424 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 CD226Q15762 336 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 NUP214P35658 2090 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 SLC22A20A6NK97 555 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 CA11O75493 328 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 APCSP02743 223 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 OR4S2Q8NH73 311 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 LPAR5Q9H1C0 372 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 HSF4Q9ULV5 492 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 LIPT2A6NK58 231 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 SHISA8B8ZZ34 492 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 SIAH2O43255 324 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 CD8AP01732 235 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 RNPS1Q15287 305 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 HFEQ30201 348 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 WDFY1Q8IWB7 410 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 PRSS27Q9BQR3 290 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 LRRC61Q9BV99 259 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 DDA1Q9BW61 102 aa13.17□□□□□ -0.3
SMARCA4-207ENST00000541122 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 IER3P46695 156 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 DUSP2Q05923 314 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 PMCHL1Q16048 86 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 SMCHD1A6NHR9 2005 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 IGHV3-64DA0A0J9YX35 117 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 IGSF23A1L1A6 192 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 ADAM11O75078 769 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 H2BFSP57053 126 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 ZNF260Q3ZCT1 412 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 UNQ9370/PRO34162Q6UXP9 181 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 GPBAR1Q8TDU6 330 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 YBX2Q9Y2T7 364 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 GCM2O75603 506 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 HKR1P10072 659 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 SF3B5Q9BWJ5 86 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 UQCR10Q9UDW1 63 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 MRPS18BQ9Y676 258 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 A0A1W2PN81 502 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 SNCGO76070 127 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 OPRK1P41145 380 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 SUCLG1P53597 346 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 RIGQ13278 110 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 DEFB108BQ8NET1 73 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 OR4A4PQ8NGN8 299 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 NUDT16L1Q9BRJ7 211 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 SLC2A8Q9NY64 477 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 OR2W1Q9Y3N9 320 aa13.16□□□□□ -0.3
SMARCA4-207ENST00000541122 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 SMPD2O60906 423 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 RECKO95980 971 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 PLPPR5Q32ZL2 321 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 ZNF766Q5HY98 468 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 C1orf100Q5SVJ3 147 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 PDPNQ86YL7 162 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 CCL28Q9NRJ3 127 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 DOK5Q9P104 306 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 WASHC3Q9Y3C0 194 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 TRBV5-7A0A0A0MS05 114 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 HELTA6NFD8 242 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 SRSF10O75494 262 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 HAND1O96004 215 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 ZADH2Q8N4Q0 377 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 EIF4E3Q8N5X7 224 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 R3HDM4Q96D70 268 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 GGACTQ9BVM4 153 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 CES1P1Q9UKY3 287 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 TNFSF14O43557 240 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 SMIM17P0DL12 118 aa13.15□□□□□ -0.3
SMARCA4-207ENST00000541122 RPL36A-HNRNPH2H7BZ11 118 aa13.15□□□□□ -0.31
SMARCA4-207ENST00000541122 VEGFBP49765 207 aa13.15□□□□□ -0.31
SMARCA4-207ENST00000541122 FNDC7Q5VTL7 733 aa13.15□□□□□ -0.31
SMARCA4-207ENST00000541122 C19orf48Q6RUI8 117 aa13.15□□□□□ -0.31
SMARCA4-207ENST00000541122 OR2V2Q96R30 315 aa13.15□□□□□ -0.31
SMARCA4-207ENST00000541122 MYOZ1Q9NP98 299 aaPredicted RBP13.15□□□□□ -0.31
SMARCA4-207ENST00000541122 KCNK7Q9Y2U2 307 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms