RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 OR5T2Q8NGG2 359 aa14.86□□□□□ -0.03
CLIP1-215ENST00000541108 OR5H2Q8NGV7 314 aa14.86□□□□□ -0.03
CLIP1-215ENST00000541108 CCL17Q92583 94 aa14.86□□□□□ -0.03
CLIP1-215ENST00000541108 SLC25A21Q9BQT8 299 aaPredicted RBP14.86□□□□□ -0.03
CLIP1-215ENST00000541108 Q9N2K0 584 aa14.86□□□□□ -0.03
CLIP1-215ENST00000541108 ZNF222Q9UK12 451 aa14.86□□□□□ -0.03
CLIP1-215ENST00000541108 MGAT4AQ9UM21 535 aa14.86□□□□□ -0.03
CLIP1-215ENST00000541108 TRAV38-1A0A0B4J264 116 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 NDUFB6O95139 128 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 FSTL3O95633 263 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 PMP2P02689 132 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 CEBPDP49716 269 aaPredicted RBP14.85□□□□□ -0.03
CLIP1-215ENST00000541108 HFEQ30201 348 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 ZNF880Q6PDB4 577 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 C17orf107Q6ZR85 190 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 GLCCI1Q86VQ1 547 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 ZNF561Q8N587 486 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 MRPL30Q8TCC3 161 aaKnown RBP14.85□□□□□ -0.03
CLIP1-215ENST00000541108 NEU4Q8WWR8 484 aaPredicted RBP14.85□□□□□ -0.03
CLIP1-215ENST00000541108 MAFIPQ8WZ33 124 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 UPRTQ96BW1 309 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 SNX22Q96L94 193 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 SLC6A7Q99884 636 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 PPA2Q9H2U2 334 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 TANC2Q9HCD6 1990 aa14.85□□□□□ -0.03
CLIP1-215ENST00000541108 PPIAL4EA0A075B759 164 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 IGKV1D-8A0A087WSZ0 117 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 KIR2DS1A0A191URI9 304 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 PPIAL4DF5H284 164 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 ZNF737O75373 536 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 PPIAL4FP0DN26 164 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 KIR2DS4P43632 304 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 BTG1P62324 171 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 MRPS11P82912 194 aaKnown RBP14.84□□□□□ -0.03
CLIP1-215ENST00000541108 KIR2DS1Q14954 304 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 ATPAF1Q5TC12 328 aaPredicted RBP14.84□□□□□ -0.03
CLIP1-215ENST00000541108 STUMQ69YW2 141 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 SLC35E4Q6ICL7 350 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 Q6ZPA2 131 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 MOB1BQ7L9L4 216 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 TMEM17Q86X19 198 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 TGIF2LYQ8IUE0 185 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 SDSLQ96GA7 329 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 SHARPINQ9H0F6 387 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 DNTTIP1Q9H147 329 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 DLL4Q9NR61 685 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 NUDT15Q9NV35 164 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 LAMP3Q9UQV4 416 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 PPIAL4AQ9Y536 164 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 RAI1Q7Z5J4 1906 aaPredicted RBP14.84□□□□□ -0.03
CLIP1-215ENST00000541108 IGHV3OR15-7A0A075B7D8 119 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 TMEM82A0PJX8 343 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 INMT-MINDY4F8WBC2 141 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 LGALS8O00214 317 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 CD80P33681 288 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 RBMXP38159 391 aaKnown RBP14.84□□□□□ -0.03
CLIP1-215ENST00000541108 GABRA2P47869 451 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 ARPC4P59998 168 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 TLE4Q04727 773 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 CDK10Q15131 360 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 FAM201AQ5SY85 155 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 IDO2Q6ZQW0 420 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 OR5D13Q8NGL4 314 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 PLPPR1Q8TBJ4 325 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 NECAP2Q9NVZ3 263 aa14.84□□□□□ -0.03
CLIP1-215ENST00000541108 K7N7A8 449 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 OR3A1P47881 315 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 TSPAN5P62079 268 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 RSBN1Q5VWQ0 802 aaPredicted RBP14.83□□□□□ -0.04
CLIP1-215ENST00000541108 C20orf204Q6ZNR8 217 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 ZNF788Q6ZQV5 615 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 ASCC1Q8N9N2 400 aaKnown RBP14.83□□□□□ -0.04
CLIP1-215ENST00000541108 FAM234AQ9H0X4 552 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 C20orf85Q9H1P6 137 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 ZNF665Q9H7R5 613 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 UBTD1Q9HAC8 227 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 MBNL3Q9NUK0 354 aaKnown RBP14.83□□□□□ -0.04
CLIP1-215ENST00000541108 DCAF16Q9NXF7 216 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 RALYQ9UKM9 306 aaKnown RBP14.83□□□□□ -0.04
CLIP1-215ENST00000541108 MAB21L2Q9Y586 359 aa14.83□□□□□ -0.04
CLIP1-215ENST00000541108 SPTAN1Q13813 2472 aaKnown RBP14.82□□□□□ -0.04
CLIP1-215ENST00000541108 TMEM30CPA0ZSE6 113 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 TRDCB7Z8K6 153 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 MGST3O14880 152 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 DHFRP00374 187 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 CTXN2P0C2S0 81 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 H2AFB2P0C5Z0 115 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 ATXN7L3Q14CW9 347 aaPredicted RBP14.82□□□□□ -0.04
CLIP1-215ENST00000541108 TERB2Q8NHR7 220 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 GINS4Q9BRT9 223 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 EHFQ9NZC4 300 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 METRNQ9UJH8 293 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 DSCAMO60469 2012 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 COL12A1Q99715 3063 aa14.82□□□□□ -0.04
CLIP1-215ENST00000541108 TRAV6A0A075B6T7 132 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 NDUFA2O43678 99 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 PLA2G2AP14555 144 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 MECP2P51608 486 aaKnown RBP14.81□□□□□ -0.04
CLIP1-215ENST00000541108 KCNJ8Q15842 424 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 SCGB2B2Q4G0G5 96 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms