RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 MEX3AA1L020 520 aaKnown RBP10.65□□□□□ -0.7
LTBR-208ENST00000541005 FAM181BA6NEQ2 426 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 CSTBP04080 98 aaKnown RBP10.65□□□□□ -0.7
LTBR-208ENST00000541005 MAS1P04201 325 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 UCHL1P09936 223 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 CD37P11049 281 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 GTF2F2P13984 249 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 SERPINA2P20848 420 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 PSMA1P25786 263 aaKnown RBP10.65□□□□□ -0.7
LTBR-208ENST00000541005 GLIPR1P48060 266 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 ATXN7L3Q14CW9 347 aaPredicted RBP10.65□□□□□ -0.7
LTBR-208ENST00000541005 TAF9Q16594 264 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 SLC22A6Q4U2R8 563 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 FAM27D1Q5T7N8 215 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 HEPN1Q6WQI6 88 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 ZNF367Q7RTV3 350 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 TRAPPC6BQ86SZ2 158 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 LRRTM1Q86UE6 522 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 OR4D6Q8NGJ1 314 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 OR5R1Q8NH85 324 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 C17orf50Q8WW18 174 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 MUL1Q969V5 352 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 NR1H4Q96RI1 486 aaPredicted RBP10.65□□□□□ -0.7
LTBR-208ENST00000541005 MGLLQ99685 303 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 CCDC90BQ9GZT6 254 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 PPIL3Q9H2H8 161 aaKnown RBP10.65□□□□□ -0.7
LTBR-208ENST00000541005 OR6C3Q9NZP0 311 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 ING4Q9UNL4 249 aa10.65□□□□□ -0.7
LTBR-208ENST00000541005 A0A1W2PP11 408 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A10PA6NDY2 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A18PA6NE21 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A16PA6NEW6 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A20PA6NIJ5 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A7PA6NKC0 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A22PA8MWA6 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A12PA8MX19 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A5PA8MXJ8 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A23PA8MXZ1 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 GEMIN2O14893 280 aaKnown RBP10.64□□□□□ -0.71
LTBR-208ENST00000541005 GPR137BO60478 399 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 NDUFA7O95182 113 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A15PP0C7V4 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A13PP0C7W8 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A14PP0C7W9 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FAM90A24PP0C7X0 464 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 CGB3P0DN86 165 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 CGB7P0DN87 165 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 CD34P28906 385 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 MAP2K4P45985 399 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 RSBN1Q5VWQ0 802 aaPredicted RBP10.64□□□□□ -0.71
LTBR-208ENST00000541005 AWAT2Q6E213 333 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 GLIPR1L1Q6UWM5 242 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 TMEM91Q6ZNR0 172 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 GDPGP1Q6ZNW5 385 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 SUMF2Q8NBJ7 301 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 FOXRED1Q96CU9 486 aaPredicted RBP10.64□□□□□ -0.71
LTBR-208ENST00000541005 DPCDQ9BVM2 203 aaPredicted RBP10.64□□□□□ -0.71
LTBR-208ENST00000541005 TMEM133Q9H2Q1 129 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 LINC00574Q9H8X3 128 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 TCF7L1Q9HCS4 588 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 ZNF581Q9P0T4 197 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 RCC2Q9P258 522 aaKnown RBP10.64□□□□□ -0.71
LTBR-208ENST00000541005 GHRLQ9UBU3 117 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 MMP24Q9Y5R2 645 aa10.64□□□□□ -0.71
LTBR-208ENST00000541005 A0A087X0M5 115 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 IGHV2-26A0A0B4J1V2 119 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 A0A1B0GX30 115 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 BTBD17A6NE02 478 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 ZNF729A6NN14 1252 aaPredicted RBP10.63□□□□□ -0.71
LTBR-208ENST00000541005 VGLL3A8MV65 326 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 HSPB6O14558 160 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 MMP23AO75900 390 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 OR7C1O76099 320 aaPredicted RBP10.63□□□□□ -0.71
LTBR-208ENST00000541005 HSMCR30P0CW71 290 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 SRMP19623 302 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 CFPP27918 469 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 GABRA5P31644 462 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 RPS25P62851 125 aaKnown RBP10.63□□□□□ -0.71
LTBR-208ENST00000541005 LRRC75BQ2VPJ9 315 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 HSD17B12Q53GQ0 312 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 C1orf100Q5SVJ3 147 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 MINOS1Q5TGZ0 78 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 OR52W1Q6IF63 320 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 CEACAM19Q7Z692 300 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 PLPPR1Q8TBJ4 325 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 CLEC7AQ9BXN2 247 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 BARHL1Q9BZE3 327 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 SPACA1Q9HBV2 294 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 ACOT13Q9NPJ3 140 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 C1RLQ9NZP8 487 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 KIF25Q9UIL4 384 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 MINOS1-NBL1R4GNA1 71 aa10.63□□□□□ -0.71
LTBR-208ENST00000541005 KBTBD11-OT1A0A1B0GTJ5 212 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 A0A1B0GUS0 222 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 ARG1P05089 322 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 CRYBA1P05813 215 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 UBBP0CG47 229 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 MGMTP16455 207 aa10.62□□□□□ -0.71
LTBR-208ENST00000541005 CDK2P24941 298 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms