RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 GCH1P30793 250 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 ECI1P42126 302 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 NPY4RP50391 375 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 PPP1R1AQ13522 171 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 SRSF7Q16629 238 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMAD3-204ENST00000540846 ZNF672Q499Z4 452 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-204ENST00000540846 ZNF660Q6AZW8 331 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-204ENST00000540846 BRICD5Q6PL45 260 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 VHLLQ6RSH7 139 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 Q6ZR03 302 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 C12orf45Q8N5I9 185 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-204ENST00000540846 SPERTQ8NA61 448 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 ASB13Q8WXK3 278 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 GTF3AQ92664 365 aaKnown RBP10.54□□□□□ -0.72
SMAD3-204ENST00000540846 SCGB3A2Q96PL1 93 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 TLNRD1Q9H1K6 362 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 CXXC4Q9H2H0 198 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 ZNF286AQ9HBT8 521 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 ATP23Q9Y6H3 246 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 PTPN13Q12923 2485 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 FBN2P35556 2912 aa10.54□□□□□ -0.72
SMAD3-204ENST00000540846 C9orf170A2RU37 121 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 NOS1APO75052 506 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-204ENST00000540846 KLF3P57682 345 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-204ENST00000540846 IFITM2Q01629 132 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 DHODHQ02127 395 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 LAMTOR1Q6IAA8 161 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 C9orf62Q8N4C0 152 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 ADAD2Q8NCV1 583 aaKnown RBP10.53□□□□□ -0.72
SMAD3-204ENST00000540846 TMEM185AQ8NFB2 350 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 OR2T35Q8NGX2 323 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 C5orf66Q9H5L9 145 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 DECR2Q9NUI1 292 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 NECAP2Q9NVZ3 263 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 CELSR2Q9HCU4 2923 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 CENPEQ02224 2701 aa10.53□□□□□ -0.72
SMAD3-204ENST00000540846 CHD3Q12873 2000 aaKnown RBP10.53□□□□□ -0.72
SMAD3-204ENST00000540846 FAM172BPA6NC97 362 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 OR5H14A6NHG9 310 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 MCRIP1C9JLW8 97 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 GOSR2O14653 212 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 RGS13O14921 159 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 GOSR1O95249 250 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 OR4A8P0C604 315 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 OR5H8P0DN80 308 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 CD34P28906 385 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 H2BFSP57053 126 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 C2orf68Q2NKX9 166 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 MST1LQ2TV78 715 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 SUMF2Q8NBJ7 301 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 POC1AQ8NBT0 407 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 OR11H4Q8NGC9 324 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 MITD1Q8WV92 249 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 TMEM230Q96A57 120 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 PSMG3-AS1Q96PY0 264 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 SYT3Q9BQG1 590 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 HES4Q9HCC6 221 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 PLSCR3Q9NRY6 295 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 OPN4Q9UHM6 478 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 TACC2O95359 2948 aa10.52□□□□□ -0.72
SMAD3-204ENST00000540846 CACNA1DQ01668 2161 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 TRAV24A0A0B4J272 114 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 ZSCAN5BA6NJL1 495 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 F5H5P2 479 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 CDIPTO14735 213 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 DUS4LO95620 317 aaKnown RBP10.52□□□□□ -0.73
SMAD3-204ENST00000540846 DNASE1P24855 282 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 DUSP1P28562 367 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 EFNB3Q15768 340 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 TMEM128Q5BJH2 165 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 DCAF12L2Q5VW00 463 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 Q6P435 159 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 DHRS9Q9BPW9 319 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 RTBDNQ9BSG5 229 aaPredicted RBP10.52□□□□□ -0.73
SMAD3-204ENST00000540846 CHIAQ9BZP6 476 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 RIMS4Q9H426 269 aaPredicted RBP10.52□□□□□ -0.73
SMAD3-204ENST00000540846 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.73
SMAD3-204ENST00000540846 CISD1Q9NZ45 108 aaKnown RBP10.52□□□□□ -0.73
SMAD3-204ENST00000540846 PAIP2BQ9ULR5 123 aaKnown RBP10.52□□□□□ -0.73
SMAD3-204ENST00000540846 MGAT4AQ9UM21 535 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 BOLA1Q9Y3E2 137 aa10.52□□□□□ -0.73
SMAD3-204ENST00000540846 TRBV6-6A0A0A6YYG2 114 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 SLC22A5O76082 557 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 GRPP07492 148 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 GSTT2P0CG29 244 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 AKR1C4P17516 323 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 HLA-GP17693 338 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 VAMP1P23763 118 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 APOBEC3AP31941 199 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-204ENST00000540846 IL13RA1P78552 427 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 SRSF4Q08170 494 aaKnown RBP10.51□□□□□ -0.73
SMAD3-204ENST00000540846 MZT1Q08AG7 82 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 RBM39Q14498 530 aaKnown RBP10.51□□□□□ -0.73
SMAD3-204ENST00000540846 ZNF146Q15072 292 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 Q5BKY6 102 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 SPIN3Q5JUX0 258 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 LY6G6FQ5SQ64 297 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 DHRS11Q6UWP2 260 aa10.51□□□□□ -0.73
SMAD3-204ENST00000540846 C11orf53Q8IXP5 236 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms