RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 BUB1B-PAK6H3BSN5 160 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 SLC33A1O00400 549 aaPredicted RBP12.91□□□□□ -0.34
TRIM65-203ENST00000540812 ZNF44P15621 663 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 PTGFRP43088 359 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 GALEQ14376 348 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 C17orf58Q2M2W7 97 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 KRBOX4Q5JUW0 171 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 C11orf87Q6NUJ2 197 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 FDX2Q6P4F2 183 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 OR13C9Q8NGT0 318 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 NRG4Q8WWG1 115 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 TFAP2CQ92754 450 aa12.91□□□□□ -0.34
TRIM65-203ENST00000540812 RCC1LQ96I51 464 aaKnown RBP12.91□□□□□ -0.34
TRIM65-203ENST00000540812 A0A087X0M5 115 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 A0A1B0GX30 115 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 TOR1AO14656 332 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 CSN2P05814 226 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 HOXD3P31249 432 aaPredicted RBP12.9□□□□□ -0.34
TRIM65-203ENST00000540812 OR3A4PP47883 348 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 ARHGDIBP52566 201 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 RIPK1Q13546 671 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 RBM39Q14498 530 aaKnown RBP12.9□□□□□ -0.34
TRIM65-203ENST00000540812 ATXN7L3Q14CW9 347 aaPredicted RBP12.9□□□□□ -0.34
TRIM65-203ENST00000540812 SMN1Q16637 294 aaKnown RBP12.9□□□□□ -0.34
TRIM65-203ENST00000540812 VAX1Q5SQQ9 334 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 C8orf59Q8N0T1 100 aaPredicted RBP12.9□□□□□ -0.34
TRIM65-203ENST00000540812 OR4D6Q8NGJ1 314 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 OR52I1Q8NGK6 324 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 CNIH3Q8TBE1 160 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 NEK6Q9HC98 313 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
TRIM65-203ENST00000540812 MYRFQ9Y2G1 1151 aa12.9□□□□□ -0.34
TRIM65-203ENST00000540812 IRGMA1A4Y4 181 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 OR4C45A6NMZ5 311 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 MT-ND2P03891 347 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 HTR1AP08908 422 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 GNAO1P09471 354 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 OCM2P0CE71 109 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 OCMP0CE72 109 aaPredicted RBP12.89□□□□□ -0.35
TRIM65-203ENST00000540812 NFYBP25208 207 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 CEACAM3P40198 252 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 PRRX1P54821 245 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 CDK5R1Q15078 307 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 C18orf65Q6ZTR6 163 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 LINC00482Q8N8I6 264 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 OR13C3Q8NGS6 347 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 FBLIM1Q8WUP2 373 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 CREB3L1Q96BA8 519 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 PELI1Q96FA3 418 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 ZNF649Q9BS31 505 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 ALG8Q9BVK2 526 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 JAM3Q9BX67 310 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 PCDHGB5Q9Y5G0 923 aa12.89□□□□□ -0.35
TRIM65-203ENST00000540812 HUWE1Q7Z6Z7 4374 aaKnown RBP12.89□□□□□ -0.35
TRIM65-203ENST00000540812 TENM3Q9P273 2699 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 ZNF729A6NN14 1252 aaPredicted RBP12.88□□□□□ -0.35
TRIM65-203ENST00000540812 J3QLW9 94 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 HSPB6O14558 160 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 DEGS1O15121 323 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 IGHV3-7P01780 117 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 ZNF19P17023 458 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 DCKP27707 260 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 CCR9P51686 369 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 ZP1P60852 638 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 CCDC144NLQ6NUI1 221 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 ZNF329Q86UD4 541 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 LHFPL3Q86UP9 236 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 SYS1Q8N2H4 156 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 OSR2Q8N2R0 312 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 CHST4Q8NCG5 386 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 KIRREL1Q96J84 757 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 C4orf36Q96KX1 117 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 ZCCHC4Q9H5U6 513 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 ERVK13-1Q9NX77 482 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 MOB4Q9Y3A3 225 aa12.88□□□□□ -0.35
TRIM65-203ENST00000540812 KBTBD11-OT1A0A1B0GTJ5 212 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 PSMB11A5LHX3 300 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A18PA6NE21 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A16PA6NEW6 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A20PA6NIJ5 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A9PA6NNJ1 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 OOSP1A8MZH6 123 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 SNRNP70P08621 437 aaKnown RBP12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 CGB3P0DN86 165 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 CGB7P0DN87 165 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 MNDAP41218 407 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 GLP1RP43220 463 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 AQP4P55087 323 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 EGFEM1PQ0D2K5 195 aa12.87□□□□□ -0.35
TRIM65-203ENST00000540812 MRPL28Q13084 256 aaKnown RBP12.87□□□□□ -0.35
TRIM65-203ENST00000540812 ALKBH1Q13686 389 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms