RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 ZIK1Q3SY52 487 aaPredicted RBP11.23□□□□□ -0.61
SNHG1-213ENST00000540725 PAN3Q58A45 887 aaKnown RBP11.23□□□□□ -0.61
SNHG1-213ENST00000540725 LHFPL3Q86UP9 236 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 OR51T1Q8NGJ9 327 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 OR5D14Q8NGL3 314 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 PYDC1Q8WXC3 89 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 TOMM40LQ969M1 308 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 RPEQ96AT9 228 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 ALG8Q9BVK2 526 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 INPP5EQ9NRR6 644 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 AASSQ9UDR5 926 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 KIF25Q9UIL4 384 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 MOB4Q9Y3A3 225 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 HSPE1-MOB4S4R3N1 261 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 DNAH9Q9NYC9 4486 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 E9PQ18 207 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 FAM106CPP0CH98 169 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 CGB3P0DN86 165 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 CGB7P0DN87 165 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 GALEQ14376 348 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 ZNF691Q5VV52 312 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 LPCAT4Q643R3 524 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 SERPINA12Q8IW75 414 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 SYS1Q8N2H4 156 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 OSR2Q8N2R0 312 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 PARP16Q8N5Y8 322 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 OR13A1Q8NGR1 328 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 NR1H4Q96RI1 486 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-213ENST00000540725 ISG20L2Q9H9L3 353 aaKnown RBP11.22□□□□□ -0.61
SNHG1-213ENST00000540725 PCDHB16Q9NRJ7 776 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 CALYQ9NYX4 217 aa11.22□□□□□ -0.61
SNHG1-213ENST00000540725 AMMECR1Q9Y4X0 333 aaPredicted RBP11.22□□□□□ -0.61
SNHG1-213ENST00000540725 MEIKINA0A087WXM9 373 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 TRAV24A0A0B4J272 114 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 PSMB11A5LHX3 300 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A18PA6NE21 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A16PA6NEW6 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A20PA6NIJ5 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 TMEM212A6NML5 194 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A9PA6NNJ1 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A12PA8MX19 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A5PA8MXJ8 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 J3QR06 171 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 ZFPL1O95159 310 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 DUS4LO95620 317 aaKnown RBP11.21□□□□□ -0.61
SNHG1-213ENST00000540725 IL1AP01583 271 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 IGHV3-7P01780 117 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 SNRNP70P08621 437 aaKnown RBP11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A15PP0C7V4 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A13PP0C7W8 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A14PP0C7W9 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 FAM90A24PP0C7X0 464 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 ALDH3A2P51648 485 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 ELP2Q6IA86 826 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 THNSL2Q86YJ6 484 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 ZNF565Q8N9K5 539 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 PXT1Q8NFP0 134 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 OR56B4Q8NH76 319 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 OR5AK2Q8NH90 309 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 CNIH3Q8TBE1 160 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 TSEN15Q8WW01 171 aaKnown RBP11.21□□□□□ -0.61
SNHG1-213ENST00000540725 LEAP2Q969E1 77 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 MYCBPQ99417 103 aaPredicted RBP11.21□□□□□ -0.61
SNHG1-213ENST00000540725 PDCD1LG2Q9BQ51 273 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 NCOR1P1Q9H4R4 102 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 IDI2-AS1Q9NZ38 188 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 DHDHQ9UQ10 334 aa11.21□□□□□ -0.61
SNHG1-213ENST00000540725 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 WI2-2373I1.2A0A1W2PRP0 233 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 E9PI62 339 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 RPSAP08865 295 aaKnown RBP11.2□□□□□ -0.62
SNHG1-213ENST00000540725 GABRB1P18505 474 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 C21orf33P30042 268 aaPredicted RBP11.2□□□□□ -0.62
SNHG1-213ENST00000540725 KRTAP10-11P60412 298 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 IL13RA2Q14627 380 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 DRAM1Q8N682 238 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 LINC00482Q8N8I6 264 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 ZNF649Q9BS31 505 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 BARHL1Q9BZE3 327 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 GMPPBQ9Y5P6 360 aa11.2□□□□□ -0.62
SNHG1-213ENST00000540725 KMT2CQ8NEZ4 4911 aaKnown RBP11.2□□□□□ -0.62
SNHG1-213ENST00000540725 ERICH4A6NGS2 130 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 GABRPO00591 440 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 FADS2O95864 444 aaKnown RBP11.19□□□□□ -0.62
SNHG1-213ENST00000540725 CCDC159P0C7I6 412 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 TMEM11P17152 192 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 RAB3AP20336 220 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 MRPL28Q13084 256 aaKnown RBP11.19□□□□□ -0.62
SNHG1-213ENST00000540725 MADCAM1Q13477 382 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 DIAPH2-AS1Q14236 149 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 HES1Q14469 280 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 LTC4SQ16873 150 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 RSBN1Q5VWQ0 802 aaPredicted RBP11.19□□□□□ -0.62
SNHG1-213ENST00000540725 ETV3LQ6ZN32 361 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 ZNF329Q86UD4 541 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 SATL1Q86VE3 508 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 CBR4Q8N4T8 237 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 C5orf56Q8N8D9 126 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms