RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 NAT8Q9UHE5 227 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 PRSS50Q9UI38 385 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 IER3IP1Q9Y5U9 82 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 TRAV8-6A0A0B4J262 113 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 ZFP92A6NM28 416 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 ALG1L2C9J202 215 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 MTX2O75431 263 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 STC2O76061 302 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 BCL2P10415 239 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 CCNOP22674 350 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 CCKBRP32239 447 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 B4GALNT1Q00973 533 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 ZP4Q12836 540 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 RAB31Q13636 194 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 KIAA1644Q3SXP7 199 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 RTN4RL2Q86UN3 420 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 DEFB123Q8N688 67 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 TCTEX1D1Q8N7M0 179 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 RCBTB1Q8NDN9 531 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 PLD4Q96BZ4 506 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 TAAR6Q96RI8 345 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 SIGMAR1Q99720 223 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 SPON2Q9BUD6 331 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 SAMD10Q9BYL1 202 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 S1PR5Q9H228 398 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 OR51I2Q9H344 312 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 CISD1Q9NZ45 108 aaKnown RBP8.22□□□□□ -1.09
CLIP1-214ENST00000540539 RHBDD3Q9Y3P4 386 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 OR51B2Q9Y5P1 312 aa8.22□□□□□ -1.09
CLIP1-214ENST00000540539 SPTBN5Q9NRC6 3674 aaKnown RBP8.21□□□□□ -1.09
CLIP1-214ENST00000540539 NSG1A0A0A6YYJ2 146 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 FIGNL2A6NMB9 653 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 ZIC2O95409 532 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-214ENST00000540539 ABHD16AO95870 558 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 HAND1O96004 215 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 HBE1P02100 147 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 KLKB1P03952 638 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 ZNF93P35789 620 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-214ENST00000540539 CSNK1A1P48729 337 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 MLF1P58340 268 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 CYP2G1PQ6ZSU1 146 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 MRPL24Q96A35 216 aaKnown RBP8.21□□□□□ -1.09
CLIP1-214ENST00000540539 LMLNQ96KR4 655 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 ZNF681Q96N22 645 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 PHF7Q9BWX1 381 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-214ENST00000540539 HIF1ANQ9NWT6 349 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 PLA2G3Q9NZ20 509 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 THYN1Q9P016 225 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 RARRES3Q9UL19 164 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 NUP210Q8TEM1 1887 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-214ENST00000540539 GTF3C1Q12789 2109 aa8.21□□□□□ -1.09
CLIP1-214ENST00000540539 TACSTD2P09758 323 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 MPC1LP0DKB6 136 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 CD1BP29016 333 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 CORO1AP31146 461 aaKnown RBP8.21□□□□□ -1.1
CLIP1-214ENST00000540539 ADMP35318 185 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 HNRNPA1L2Q32P51 320 aaKnown RBP8.21□□□□□ -1.1
CLIP1-214ENST00000540539 FCRL6Q6DN72 434 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 DEFB125Q8N687 156 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 OR2I1PQ8NGU4 316 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 WDYHV1Q96HA8 205 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 ATP5SQ99766 215 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 SMIM7Q9BQ49 75 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 ZNF665Q9H7R5 613 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 PLEKHJ1Q9NW61 149 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 LRIT1Q9P2V4 623 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 CCL26Q9Y258 94 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 UNC80Q8N2C7 3258 aa8.21□□□□□ -1.1
CLIP1-214ENST00000540539 EDDM13A0A1B0GTR0 161 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 LRRC3CA6NJW4 275 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 METTL12A8MUP2 240 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 TNFSF12O43508 249 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 HCRTR1O43613 425 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 NPIPB7O75200 414 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 ZNF205O95201 554 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 HMGN2P05204 90 aaKnown RBP8.2□□□□□ -1.1
CLIP1-214ENST00000540539 TIMP3P35625 211 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 MTCP1P56278 107 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
CLIP1-214ENST00000540539 CSNK2A1P68400 391 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-214ENST00000540539 POU3F1Q03052 451 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-214ENST00000540539 DMWDQ09019 674 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 TMEM267Q0VDI3 215 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-214ENST00000540539 MPV17L2Q567V2 206 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 PHYHD1Q5SRE7 291 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 CFAP52Q8N1V2 620 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 SMRP1Q8NCR6 262 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 CSNK2A3Q8NEV1 391 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 ZPLD1Q8TCW7 415 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 TNFRSF13CQ96RJ3 184 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 WNT10AQ9GZT5 417 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 C1orf123Q9NWV4 160 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 PLEK2Q9NYT0 353 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 SERTAD3Q9UJW9 196 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 GON4LQ3T8J9 2241 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 MYOFQ9NZM1 2061 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 TMEM212A6NML5 194 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 TSPAN13O95857 204 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 CLEC3BP05452 202 aa8.2□□□□□ -1.1
CLIP1-214ENST00000540539 AADACP22760 399 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms