RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TXNL1O43396 289 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 SCAF4O95104 1147 aaKnown RBP11.42□□□□□ -0.58
UBE3B-209ENST00000539584 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
UBE3B-209ENST00000539584 MLF1P58340 268 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF92Q03936 586 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 TGIF1Q15583 401 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 LINC00596Q86U02 117 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF429Q86V71 674 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 RPS19BP1Q86WX3 136 aaKnown RBP11.42□□□□□ -0.58
UBE3B-209ENST00000539584 ZFP62Q8NB50 900 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-209ENST00000539584 TMEM171Q8WVE6 324 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 PIGCQ92535 297 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 EXTL1Q92935 676 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 MR1Q95460 341 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 RAB39BQ96DA2 213 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 ATP5SQ99766 215 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 WNT5BQ9H1J7 359 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF581Q9P0T4 197 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 WSB1Q9Y6I7 421 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 FAM221AA4D161 298 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 C9J4A7 227 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 S100A2P29034 98 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 TAS2R30P59541 319 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 FGF12P61328 243 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 RNPS1Q15287 305 aaKnown RBP11.42□□□□□ -0.58
UBE3B-209ENST00000539584 ABLIM2Q6H8Q1 611 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 COLCA1Q6ZS62 124 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 STX12Q86Y82 276 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 DYRK2Q92630 601 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 SIGLEC12Q96PQ1 595 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 GGACTQ9BVM4 153 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 PLK3Q9H4B4 646 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 ELOA3CA0A087WX78 387 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-209ENST00000539584 TRAV20A0A0B4J274 112 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 LY6G6EA0A0G2JKS1 128 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 SEC14L6B5MCN3 397 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 YKT6O15498 198 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 ADAM20O43506 726 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 SSSCA1O60232 199 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 GLI4P10075 376 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 GLIPR1P48060 266 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 NPBWR2P48146 333 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 B3GALT5-AS1P59052 145 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 ELOBQ15370 118 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 IGSF11Q5DX21 431 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 SPIN3Q5JUX0 258 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 FAM209BQ5JX69 171 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 H1FOOQ8IZA3 346 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF610Q8N9Z0 462 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 AGBL5Q8NDL9 886 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 AKR7LQ8NHP1 331 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 CLDND2Q8NHS1 167 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 CPNE4Q96A23 557 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-209ENST00000539584 JSRP1Q96MG2 331 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-209ENST00000539584 RAB40CQ96S21 281 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 GAR1Q9NY12 217 aaKnown RBP11.41□□□□□ -0.58
UBE3B-209ENST00000539584 ATP23Q9Y6H3 246 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 U3KQA8 63 aa11.41□□□□□ -0.58
UBE3B-209ENST00000539584 TRBV6-6A0A0A6YYG2 114 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 A0A1B0GU03 582 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF729A6NN14 1252 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF205O95201 554 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 IGHEP01854 428 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 UMODP07911 640 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 B4GALT1P15291 398 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 DYNLT3P51808 116 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 RPL23AP62750 156 aaKnown RBP11.4□□□□□ -0.58
UBE3B-209ENST00000539584 DLK1P80370 383 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 TRA2AQ13595 282 aaKnown RBP eCLIP11.4□□□□□ -0.58
UBE3B-209ENST00000539584 ICAM4Q14773 271 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 BRICD5Q6PL45 260 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 Q6ZPA2 131 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 SLC25A26Q70HW3 274 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 LINC00469Q8N7U9 141 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 TMEM45BQ96B21 275 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF576Q9H609 170 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 TREM2Q9NZC2 230 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 TINAGQ9UJW2 476 aa11.4□□□□□ -0.58
UBE3B-209ENST00000539584 IFNA5P01569 189 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 CCL20P78556 96 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 CEACAM16Q2WEN9 425 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 ZNF818PQ6ZRF7 136 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 CALHM1Q8IU99 346 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 MKXQ8IYA7 352 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 GAPTQ8N292 157 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 OR2Y1Q8NGV0 311 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 OR2V1Q8NHB1 315 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 SAP25Q8TEE9 199 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 SLAMF9Q96A28 289 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 P2RX4Q99571 388 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 GPR35Q9HC97 309 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 RNF115Q9Y4L5 304 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 LIPGQ9Y5X9 500 aa11.4□□□□□ -0.59
UBE3B-209ENST00000539584 SLC22A20A6NK97 555 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 CCDC85CA6NKD9 419 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 P04436 131 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 MMP7P09237 267 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-209ENST00000539584 COX5BP10606 129 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 HLA-DRB3P79483 266 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 CXorf66Q5JRM2 361 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms