RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 GYG2O15488 501 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 SOD3P08294 240 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 CECR9P0C854 216 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 VSNL1P62760 191 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 Q499Y3 187 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 C10orf107Q8IVU9 208 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 BPIFB6Q8NFQ5 453 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 HINT2Q9BX68 163 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 ULBP1Q9BZM6 244 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 SLC25A31Q9H0C2 315 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 GABARAPL1Q9H0R8 117 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 STMN3Q9NZ72 180 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 NAGKQ9UJ70 344 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 ATP7AQ04656 1500 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 SHPRHQ149N8 1683 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 DIP2AQ14689 1571 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 NRKQ7Z2Y5 1582 aa3.17□□□□□ -1.9
TRAV11-201ENST00000539512 MLH3Q9UHC1 1453 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 PRDM15P57071 1507 aaPredicted RBP3.16□□□□□ -1.9
TRAV11-201ENST00000539512 ARHGAP5Q13017 1502 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 MGAT4DA6NG13 374 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 AQP9O43315 295 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 S100A9P06702 114 aaKnown RBP3.16□□□□□ -1.9
TRAV11-201ENST00000539512 CRABP2P29373 138 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 TTPAP49638 278 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 RAB38P57729 211 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 TNNC1P63316 161 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 ACTL10Q5JWF8 245 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 Q6ZQT7 251 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 DPPA2Q7Z7J5 298 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 COMTD1Q86VU5 262 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 EIF4E3Q8N5X7 224 aaKnown RBP3.16□□□□□ -1.9
TRAV11-201ENST00000539512 ZNF738Q8NE65 137 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 OR2K2Q8NGT1 345 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 FMC1Q96HJ9 113 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 SETD5Q9C0A6 1442 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 XIRP1Q702N8 1843 aaKnown RBP3.16□□□□□ -1.9
TRAV11-201ENST00000539512 MAST1Q9Y2H9 1570 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 SHANK3Q9BYB0 1731 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 NUP153P49790 1475 aaKnown RBP3.16□□□□□ -1.9
TRAV11-201ENST00000539512 NCOA2Q15596 1464 aa3.16□□□□□ -1.9
TRAV11-201ENST00000539512 DEPDC5O75140 1603 aa3.15□□□□□ -1.9
TRAV11-201ENST00000539512 MROH2AA6NES4 1674 aa3.15□□□□□ -1.9
TRAV11-201ENST00000539512 IGKV1OR2-108A0A075B7D4 117 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 ZNF729A6NN14 1252 aaPredicted RBP3.15□□□□□ -1.91
TRAV11-201ENST00000539512 ISLRO14498 428 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 CD8AP01732 235 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 TRGV3P03979 118 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 GTF2F2P13984 249 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 CEACAM16Q2WEN9 425 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 HBMQ6B0K9 141 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 HCP5Q6MZN7 132 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 ERICH5Q6P6B1 374 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 ST13P4Q8IZP2 240 aaPredicted RBP3.15□□□□□ -1.91
TRAV11-201ENST00000539512 RPRMLQ8N4K4 120 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 CASTOR1Q8WTX7 329 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 LRRC39Q96DD0 335 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 MSANTD3Q96H12 275 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 ZNF75AQ96N20 296 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 PLEKHA1Q9HB21 404 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 SSH2Q76I76 1423 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 TIAM1Q13009 1591 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 REREQ9P2R6 1566 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 NLRP1Q9C000 1473 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 BIVM-ERCC5R4GMW8 1640 aa3.15□□□□□ -1.91
TRAV11-201ENST00000539512 UNC13BO14795 1591 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 FMN1Q68DA7 1419 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 IGHV3-43A0A0B4J1X8 118 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 A0A0B4J2C4 111 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 MYBPHLA2RUH7 354 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 GOLGA8IPA6NC78 632 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 CPSF4O95639 269 aaKnown RBP3.14□□□□□ -1.91
TRAV11-201ENST00000539512 ZNF708P17019 499 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 FOXA1P55317 472 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 TSPAN5P62079 268 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 C2orf80Q0P641 193 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 GOLGA7BQ2TAP0 167 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 NXNL2Q5VZ03 156 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 RBM45Q8IUH3 476 aaKnown RBP3.14□□□□□ -1.91
TRAV11-201ENST00000539512 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 LY6G5BQ8NDX9 201 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 ZNF396Q96N95 335 aaPredicted RBP3.14□□□□□ -1.91
TRAV11-201ENST00000539512 PITX2Q99697 317 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 SIKE1Q9BRV8 207 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 SEC16AO15027 2179 aa3.14□□□□□ -1.91
TRAV11-201ENST00000539512 H3BP45 60 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 hCG_2039718K7EN88 272 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 PSMD11O00231 422 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 UBDO15205 165 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 MYO1DO94832 1006 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 HLA-AP01891 365 aaKnown RBP3.13□□□□□ -1.91
TRAV11-201ENST00000539512 TPM1P09493 284 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
TRAV11-201ENST00000539512 PSMB9P28065 219 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 RPA3P35244 121 aaPredicted RBP3.13□□□□□ -1.91
TRAV11-201ENST00000539512 GZMMP51124 257 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 BCL2A1Q16548 175 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 ZFP82Q8N141 532 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 OR4K17Q8NGC6 315 aa3.13□□□□□ -1.91
TRAV11-201ENST00000539512 IFT81Q8WYA0 676 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms