RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SYT1P21579 422 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 CASQ1P31415 396 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 KCNJ3P48549 501 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 XKP51811 444 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 AQP5P55064 265 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 CCL23P55773 120 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 RAB38P57729 211 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 OR2B6P58173 313 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 DSTNP60981 165 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 VSNL1P62760 191 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 TRAM1Q15629 374 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 TMEM241Q24JQ0 296 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 ZNF404Q494X3 552 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 Q499Y3 187 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 HBMQ6B0K9 141 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 UGT2A3Q6UWM9 527 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 CYP4Z1Q86W10 505 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 LYPD6Q86Y78 171 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 TMEM25Q86YD3 366 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 SELENOHQ8IZQ5 122 aaKnown RBP1.28□□□□□ -2.2
CCDC7-209ENST00000539197 SYCE1Q8N0S2 351 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 SPICQ8N5J4 248 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 ZNF555Q8NEP9 628 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 C2orf15Q8WU43 125 aaKnown RBP1.28□□□□□ -2.2
CCDC7-209ENST00000539197 BLNKQ8WV28 456 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 CCL17Q92583 94 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 CCDC124Q96CT7 223 aaKnown RBP1.28□□□□□ -2.2
CCDC7-209ENST00000539197 ZMYND19Q96E35 227 aaPredicted RBP1.28□□□□□ -2.2
CCDC7-209ENST00000539197 RILPQ96NA2 401 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 GABARAPL1Q9H0R8 117 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 WDR55Q9H6Y2 383 aaPredicted RBP1.28□□□□□ -2.2
CCDC7-209ENST00000539197 TUBA4BQ9H853 241 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 SDHAF3Q9NRP4 125 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 NRBP2Q9NSY0 501 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 MAT2BQ9NZL9 334 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 DNAJC27Q9NZQ0 273 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 CHMP5Q9NZZ3 219 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 ZNF443Q9Y2A4 671 aaPredicted RBP1.28□□□□□ -2.2
CCDC7-209ENST00000539197 SIGLEC1Q9BZZ2 1709 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 H3BP45 60 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 FFAR1O14842 300 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 NEMFO60524 1076 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 CRTAPO75718 401 aaPredicted RBP1.27□□□□□ -2.21
CCDC7-209ENST00000539197 LDOC1O95751 146 aaPredicted RBP1.27□□□□□ -2.21
CCDC7-209ENST00000539197 GCLMP48507 274 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 TSPAN5P62079 268 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 DHRS2Q13268 280 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 TRIP13Q15645 432 aaPredicted RBP1.27□□□□□ -2.21
CCDC7-209ENST00000539197 CST6Q15828 149 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 SSX1Q16384 188 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 PCOTHQ58A44 107 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 CLLU1OSQ5K130 101 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 ZNF773Q6PK81 442 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 TPGS1Q6ZTW0 290 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 GALNT10Q86SR1 603 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 LINC00596Q86U02 117 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 OR4K17Q8NGC6 315 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 OR2Y1Q8NGV0 311 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 UBA3Q8TBC4 463 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 APOBEC3DQ96AK3 386 aaPredicted RBP1.27□□□□□ -2.21
CCDC7-209ENST00000539197 BIRC8Q96P09 236 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 CYTH2Q99418 400 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 ACBD6Q9BR61 282 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 ZNF436Q9C0F3 470 aaPredicted RBP1.27□□□□□ -2.21
CCDC7-209ENST00000539197 CFAP45Q9UL16 551 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 SNX24Q9Y343 169 aa1.27□□□□□ -2.21
CCDC7-209ENST00000539197 BRD4O60885 1362 aaPredicted RBP1.26□□□□□ -2.21
CCDC7-209ENST00000539197 HSBP1L1C9JCN9 74 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 F8VP50 259 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 PLPP3O14495 311 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 ISLRO14498 428 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 GYG2O15488 501 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 SGCEO43556 437 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 SLC37A4O43826 429 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 COX7A2P2O60397 106 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 NDUFS6O75380 124 aaKnown RBP1.26□□□□□ -2.21
CCDC7-209ENST00000539197 MYO1DO94832 1006 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 GP1BAP07359 652 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 SLC35E2BP0CK96 405 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 IMPA1P29218 277 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 TSPOP30536 169 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 UGT2B10P36537 528 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 MAGEA6P43360 314 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 TTPAP49638 278 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 OR10A3P58181 314 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 ANGPT1Q15389 498 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 BCL2A1Q16548 175 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 BSXQ3C1V8 233 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 CEACAM21Q3KPI0 293 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 ATP6AP1LQ52LC2 224 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 OR10J3Q5JRS4 329 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 UBE2NLQ5JXB2 153 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 CLEC12AQ5QGZ9 265 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 ERICH5Q6P6B1 374 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 CLEC18BQ6UXF7 455 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 MARCH3Q86UD3 253 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 OR6K3Q8NGY3 331 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 NELFBQ8WX92 580 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 IFT81Q8WYA0 676 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 RAD51AP1Q96B01 352 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms