RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ELF5Q9UKW6 265 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-207ENST00000539047 PKDREJQ9NTG1 2253 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 IGKV1D-17A0A075B6S4 117 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 KIR2DS1A0A191URI9 304 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 RAB3DO95716 219 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 F12P00748 615 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-207ENST00000539047 GYPAP02724 150 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 IFNA6P05013 189 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 KIR2DS4P43632 304 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 OR3A3P47888 321 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 IFITM3Q01628 133 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 KLF9Q13886 244 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-207ENST00000539047 KIR2DS1Q14954 304 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 CARTPTQ16568 116 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 FAM201AQ5SY85 155 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 STEAP1BQ6NZ63 245 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 RTN4RL2Q86UN3 420 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 HOGA1Q86XE5 327 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 TMEM185AQ8NFB2 350 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 OR5H2Q8NGV7 314 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 ANGPTL6Q8NI99 470 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 DYRK2Q92630 601 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 FAM234AQ9H0X4 552 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 TMEM165Q9HC07 324 aa12.91□□□□□ -0.34
VAMP1-207ENST00000539047 FAM240BA0A1B0GVZ2 78 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 DISC1C4P0D8 188 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 MGST3O14880 152 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 PPIHO43447 177 aaKnown RBP12.9□□□□□ -0.34
VAMP1-207ENST00000539047 ZNF205O95201 554 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 FSTL3O95633 263 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 CSN2P05814 226 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 FCER2P06734 321 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
VAMP1-207ENST00000539047 SLC35E4Q6ICL7 350 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 TRAT1Q6PIZ9 186 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 TMEM17Q86X19 198 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 OR4K15Q8NH41 348 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 SDSLQ96GA7 329 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 HDHD3Q9BSH5 251 aaPredicted RBP12.9□□□□□ -0.34
VAMP1-207ENST00000539047 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 COPZ2Q9P299 210 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 ZNF222Q9UK12 451 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 TRAPPC2LQ9UL33 140 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 TBC1D24Q9ULP9 559 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 ANAPC10Q9UM13 185 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 ROS1P08922 2347 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 LRBAP50851 2863 aa12.9□□□□□ -0.34
VAMP1-207ENST00000539047 ADGRG4Q8IZF6 3080 aa12.9□□□□□ -0.35
VAMP1-207ENST00000539047 ABCA4P78363 2273 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 OVOL3O00110 214 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 SIGLEC5O15389 551 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 TMPRSS2O15393 492 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 RP2O75695 350 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 MT-ND4P03905 459 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 NAT1P18440 290 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 HLA-DMAP28067 261 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 OR3A1P47881 315 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 ZMYND11Q15326 602 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 LRRC10Q5BKY1 277 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 KRBOX4Q5JUW0 171 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 C6orf183Q5T699 404 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF782Q6ZMW2 699 aaPredicted RBP12.89□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF497Q6ZNH5 498 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 NLRC3Q7RTR2 1065 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 TGIF2LYQ8IUE0 185 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 SPICQ8N5J4 248 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 GVQW1Q8N7I0 195 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 CCL13Q99616 98 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 C11orf54Q9H0W9 315 aaPredicted RBP12.89□□□□□ -0.35
VAMP1-207ENST00000539047 DPAGT1Q9H3H5 408 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 DCAF16Q9NXF7 216 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 ING3Q9NXR8 418 aa12.89□□□□□ -0.35
VAMP1-207ENST00000539047 MEIKINA0A087WXM9 373 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 TRBV6-6A0A0A6YYG2 114 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 K7N7A8 449 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 ADAM20O43506 726 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 NDUFB3O43676 98 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 PSPNO60542 156 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 NAPSAO96009 420 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 TK1P04183 234 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 CD3DP04234 171 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 AMY2AP04746 511 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 COL8A2P25067 703 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 GLP1RP43220 463 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 TMEM33P57088 247 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 HOXA4Q00056 320 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-207ENST00000539047 ATPAF1Q5TC12 328 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-207ENST00000539047 OR52W1Q6IF63 320 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 OR4S1Q8NGB4 309 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 OR5AP2Q8NGF4 316 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 OR4C16Q8NGL9 310 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 MRPL30Q8TCC3 161 aaKnown RBP12.88□□□□□ -0.35
VAMP1-207ENST00000539047 MARVELD3Q96A59 401 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
VAMP1-207ENST00000539047 PRRT1Q99946 306 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms