RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 FAM201AQ5SY85 155 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 BAIAP2L2Q6UXY1 529 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 WDR31Q8NA23 367 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 CCDC107Q8WV48 283 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 SLC25A28Q96A46 364 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 GPX7Q96SL4 187 aaPredicted RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 MRPL37Q9BZE1 423 aaKnown RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 METTL9Q9H1A3 318 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 MED9Q9NWA0 146 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 CRYBG3Q68DQ2 2970 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 XRCC2O43543 280 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 OR7C1O76099 320 aaPredicted RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 CLDN1O95832 211 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 CALCRP30988 508 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 CCKARP32238 428 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 MECP2P51608 486 aaKnown RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 CCR9P51686 369 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 CLDN12P56749 244 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 MFGE8Q08431 387 aaPredicted RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 ACSM3Q53FZ2 586 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 OR2W3Q7Z3T1 314 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 OR2G2Q8NGZ5 317 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 BOD1Q96IK1 185 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 OR2V2Q96R30 315 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 AUNIPQ9H7T9 357 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 PRAF2O60831 178 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 SNRPCP09234 159 aaKnown RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 GLRA1P23415 457 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 WDR38Q5JTN6 314 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 TEX30Q5JUR7 227 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 AWAT2Q6E213 333 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 OR10K2Q6IF99 312 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 SLC25A26Q70HW3 274 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 MKXQ8IYA7 352 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 ITLN1Q8WWA0 313 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 C1orf123Q9NWV4 160 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 CGGBP1Q9UFW8 167 aaPredicted RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 MRM2Q9UI43 246 aaKnown RBP7.54□□□□□ -1.2
GGA3-202ENST00000538886 ZNF391Q9UJN7 358 aa7.54□□□□□ -1.2
GGA3-202ENST00000538886 A0A1W2PPH5 198 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 C5orf52A6NGY3 159 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 PPP1R2P9O14990 202 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 SPRY1O43609 319 aaPredicted RBP7.53□□□□□ -1.2
GGA3-202ENST00000538886 CGAP01215 116 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 GLP1RP43220 463 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 GLYATL3Q5SZD4 288 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 C10orf128Q5T292 105 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 FAM27D1Q5T7N8 215 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 FAHD2BQ6P2I3 314 aaPredicted RBP7.53□□□□□ -1.2
GGA3-202ENST00000538886 ETV3LQ6ZN32 361 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 ADGRE4PQ86SQ3 457 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 PHYHIPQ92561 330 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 FAHD2AQ96GK7 314 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 RHBDD3Q9Y3P4 386 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 R4GMQ9 66 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 UNC79Q9P2D8 2635 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 DSCAMO60469 2012 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 IGHV3OR15-7A0A075B7D8 119 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 A0A1B0GV50 99 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 E7EQL1 145 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 TRAPPC2LH3BP13 241 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 SYNGR3O43761 229 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 MPIG6BO95866 241 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 FABP4P15090 132 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 GLRXP35754 106 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 GPR6P46095 362 aaPredicted RBP7.53□□□□□ -1.2
GGA3-202ENST00000538886 NKX6-1P78426 367 aaPredicted RBP7.53□□□□□ -1.2
GGA3-202ENST00000538886 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 ZNF627Q7L945 461 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 ARRDC1Q8N5I2 433 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 C1orf162Q8NEQ5 155 aaPredicted RBP7.53□□□□□ -1.2
GGA3-202ENST00000538886 OR10AC1Q8NH08 325 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 SEC22AQ96IW7 307 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 FN3KRPQ9HA64 309 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 TNFRSF19Q9NS68 423 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 NOTCH3Q9UM47 2321 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 NCOA6Q14686 2063 aaPredicted RBP7.53□□□□□ -1.2
GGA3-202ENST00000538886 HS3ST1O14792 307 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 CD80P33681 288 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 ATP1B3P54709 279 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 OR10A3P58181 314 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 TAS2R43P59537 309 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 PRDX4Q13162 271 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 DMRTA1Q5VZB9 504 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 CDPF1Q6NVV7 123 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 HIST2H3AQ71DI3 136 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 ZDHHC23Q8IYP9 409 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 OR51A4Q8NGJ6 313 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 PELI1Q96FA3 418 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 RTL8AQ9BWD3 113 aa7.53□□□□□ -1.2
GGA3-202ENST00000538886 UBE2CO00762 179 aa7.52□□□□□ -1.21
GGA3-202ENST00000538886 TMPRSS2O15393 492 aa7.52□□□□□ -1.21
GGA3-202ENST00000538886 PNPP00491 289 aa7.52□□□□□ -1.21
GGA3-202ENST00000538886 ARG1P05089 322 aa7.52□□□□□ -1.21
GGA3-202ENST00000538886 HEXAP06865 529 aa7.52□□□□□ -1.21
GGA3-202ENST00000538886 GABRA5P31644 462 aa7.52□□□□□ -1.21
GGA3-202ENST00000538886 GSK3AP49840 483 aa7.52□□□□□ -1.21
GGA3-202ENST00000538886 PSG7Q13046 419 aa7.52□□□□□ -1.21
GGA3-202ENST00000538886 ARFRP1Q13795 201 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms