RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, human

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD9-208	ENST00000538834	FAM90A12P	A8MX19	464 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	FAM90A5P	A8MXJ8	464 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	FAM90A23P	A8MXZ1	464 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	GEMIN2	O14893	280 aa	Known RBP	11.13	□□□□□ -0.63
CD9-208	ENST00000538834	HTR3B	O95264	441 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	MAS1	P04201	325 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	FBP1	P09467	338 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	FAM90A15P	P0C7V4	464 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	FAM90A13P	P0C7W8	464 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	FAM90A14P	P0C7W9	464 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	FAM90A24P	P0C7X0	464 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	ZNF44	P15621	663 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	PSMA1	P25786	263 aa	Known RBP	11.13	□□□□□ -0.63
CD9-208	ENST00000538834	RPS25	P62851	125 aa	Known RBP	11.13	□□□□□ -0.63
CD9-208	ENST00000538834	QRFP	P83859	136 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	FABP5	Q01469	135 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	GPR176	Q14439	515 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	C17orf58	Q2M2W7	97 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	SIGIRR	Q6IA17	410 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	ZNF367	Q7RTV3	350 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	SPART	Q8N0X7	666 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	PIFO	Q8TCI5	191 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	MUL1	Q969V5	352 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	SLC25A28	Q96A46	364 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834		Q96M66	194 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	DUX5	Q96PT3	197 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	TMED9	Q9BVK6	235 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	CHIA	Q9BZP6	476 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	GHRL	Q9UBU3	117 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	ING4	Q9UNL4	249 aa		11.13	□□□□□ -0.63
CD9-208	ENST00000538834	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.13	□□□□□ -0.63
CD9-208	ENST00000538834	VGLL3	A8MV65	326 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	NPIPB11	E5RHQ5	1161 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	SLC22A1	O15245	554 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	IGLV1-47	P01700	117 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	IGHV4-59	P01825	116 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	GAL	P22466	123 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	EEF1B2	P24534	225 aa	Known RBP	11.12	□□□□□ -0.63
CD9-208	ENST00000538834	CFP	P27918	469 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	GABRA5	P31644	462 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	GDNF	P39905	211 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	RELB	Q01201	579 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	EDDM3A	Q14507	147 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	TAF9	Q16594	264 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	SLC35E4	Q6ICL7	350 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	GLIPR1L1	Q6UWM5	242 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	CEACAM19	Q7Z692	300 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	TMEM104	Q8NE00	496 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.12	□□□□□ -0.63
CD9-208	ENST00000538834	PCDHB16	Q9NRJ7	776 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	NDUFB11	Q9NX14	153 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	MMP24	Q9Y5R2	645 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	SESN1	Q9Y6P5	492 aa		11.12	□□□□□ -0.63
CD9-208	ENST00000538834	MEX3A	A1L020	520 aa	Known RBP	11.11	□□□□□ -0.63
CD9-208	ENST00000538834	MEIOC	A2RUB1	952 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	ZNF729	A6NN14	1252 aa	Predicted RBP	11.11	□□□□□ -0.63
CD9-208	ENST00000538834	CLPX	O76031	633 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	GLA	P06280	429 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	GTF2F2	P13984	249 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	SERPINA2	P20848	420 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	SLC22A6	Q4U2R8	563 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	HSD17B12	Q53GQ0	312 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	KRBOX4	Q5JUW0	171 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.11	□□□□□ -0.63
CD9-208	ENST00000538834	DYNAP	Q8N1N2	210 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	JAGN1	Q8N5M9	183 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	SUMF2	Q8NBJ7	301 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	DYRK2	Q92630	601 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	TMEM203	Q969S6	136 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	ZDHHC16	Q969W1	377 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	NR1H4	Q96RI1	486 aa	Predicted RBP	11.11	□□□□□ -0.63
CD9-208	ENST00000538834	DPCD	Q9BVM2	203 aa	Predicted RBP	11.11	□□□□□ -0.63
CD9-208	ENST00000538834	CCDC90B	Q9GZT6	254 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	FAM192A	Q9GZU8	254 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	TMEM133	Q9H2Q1	129 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834		Q9H521	79 aa		11.11	□□□□□ -0.63
CD9-208	ENST00000538834	TBL2	Q9Y4P3	447 aa	Known RBP	11.11	□□□□□ -0.63
CD9-208	ENST00000538834	IGHV2-26	A0A0B4J1V2	119 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	SHISA3	A0PJX4	238 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	FAM181B	A6NEQ2	426 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	TMEM14DP	A8MWL7	114 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	NDUFA7	O95182	113 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	CSTB	P04080	98 aa	Known RBP	11.1	□□□□□ -0.63
CD9-208	ENST00000538834	UBB	P0CG47	229 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	SCN1B	Q07699	218 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.1	□□□□□ -0.63
CD9-208	ENST00000538834	PAN3	Q58A45	887 aa	Known RBP	11.1	□□□□□ -0.63
CD9-208	ENST00000538834	AWAT1	Q58HT5	328 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	UTF1	Q5T230	341 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	BAIAP2L2	Q6UXY1	529 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	LHFPL4	Q7Z7J7	247 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	OR13A1	Q8NGR1	328 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	OR13D1	Q8NGV5	346 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	MALSU1	Q96EH3	234 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	TM2D1	Q9BX74	207 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	BARHL1	Q9BZE3	327 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	DPAGT1	Q9H3H5	408 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	TCF7L1	Q9HCS4	588 aa		11.1	□□□□□ -0.63
CD9-208	ENST00000538834	OR6C3	Q9NZP0	311 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms