RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 GAFA1Q96PS6 74 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 THAP7Q9BT49 309 aaPredicted RBP11.82□□□□□ -0.52
CD4-208ENST00000538827 ZNF665Q9H7R5 613 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 CHODLQ9H9P2 273 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 SCPEP1Q9HB40 452 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.82□□□□□ -0.52
CD4-208ENST00000538827 DUX4Q9UBX2 424 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 ZNF222Q9UK12 451 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 MAP1AP78559 2803 aaPredicted RBP11.81□□□□□ -0.52
CD4-208ENST00000538827 TMEM82A0PJX8 343 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 SULT1C2O00338 296 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 ADAM20O43506 726 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 LANCL1O43813 399 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 SSX5O60225 188 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 F12P00748 615 aaPredicted RBP11.81□□□□□ -0.52
CD4-208ENST00000538827 IGHV2-70P01814 119 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 MDH2P40926 338 aaKnown RBP11.81□□□□□ -0.52
CD4-208ENST00000538827 GPR6P46095 362 aaPredicted RBP11.81□□□□□ -0.52
CD4-208ENST00000538827 OR3A1P47881 315 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 ATP5J2P56134 94 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 ACTBP60709 375 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 ACTG1P63261 375 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 GRK1Q15835 563 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 KCNJ8Q15842 424 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 ZNF525Q8N782 197 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 OR4S1Q8NGB4 309 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 PPP1R35Q8TAP8 253 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 PLPPR1Q8TBJ4 325 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 GPX8Q8TED1 209 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 RAB1CQ92928 201 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 TRIM63Q969Q1 353 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 NARFLQ9H6Q4 476 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 C12orf4Q9NQ89 552 aa11.81□□□□□ -0.52
CD4-208ENST00000538827 ACANP16112 2415 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 TMPRSS2O15393 492 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 PSPNO60542 156 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 CA11O75493 328 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 RBBP9O75884 186 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 MELTFP08582 738 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 RCVRNP35243 200 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 CBX5P45973 191 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 PDLIM4P50479 330 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 IL13RA1P78552 427 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 STEAP3Q658P3 488 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 MUC20Q8N307 709 aaPredicted RBP11.8□□□□□ -0.52
CD4-208ENST00000538827 TOMM5Q8N4H5 51 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 ZNF561Q8N587 486 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 GVQW1Q8N7I0 195 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 ZNRF1Q8ND25 227 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 TMEM246Q9BRR3 403 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 BARX1Q9HBU1 254 aaPredicted RBP11.8□□□□□ -0.52
CD4-208ENST00000538827 KLK11Q9UBX7 282 aa11.8□□□□□ -0.52
CD4-208ENST00000538827 ZNF469Q96JG9 3925 aaPredicted RBP11.8□□□□□ -0.52
CD4-208ENST00000538827 TMEM30CPA0ZSE6 113 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 SIGLEC5O15389 551 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 GLAP06280 429 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 FCGR3AP08637 254 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 RPS2P15880 293 aaKnown RBP11.79□□□□□ -0.52
CD4-208ENST00000538827 AMY2BP19961 511 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 EDDM3BP56851 147 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 KRBOX4Q5JUW0 171 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 LYPD2Q6UXB3 125 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 ZNF788Q6ZQV5 615 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 SLC36A1Q7Z2H8 476 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 LYSMD2Q8IV50 215 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 OR4K15Q8NH41 348 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 SDSLQ96GA7 329 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 SNX22Q96L94 193 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 ST6GALNAC5Q9BVH7 336 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 PALMDQ9NP74 551 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 MTFP1Q9UDX5 166 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 ZNF230Q9UIE0 474 aaPredicted RBP11.79□□□□□ -0.52
CD4-208ENST00000538827 MAB21L2Q9Y586 359 aa11.79□□□□□ -0.52
CD4-208ENST00000538827 TRAV39A0A0B4J263 110 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 CEACAM18A8MTB9 384 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 MGST3O14880 152 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 ORC5O43913 435 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 ZNF737O75373 536 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 CSF1P09603 554 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 GSTT2BP0CG30 244 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 FOSL1P15407 271 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 NDUFB7P17568 137 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 DNASE1P24855 282 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 LMO1P25800 156 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 KCNJ3P48549 501 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 AP3S2P59780 193 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 IFITM3Q01628 133 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 SHEQ5VZ18 495 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 OR52W1Q6IF63 320 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 CLEC2AQ6UVW9 174 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 C17orf107Q6ZR85 190 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 GDPD3Q7L5L3 318 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 TPRX1Q8N7U7 411 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 SPATA3Q8NHX4 192 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
CD4-208ENST00000538827 CCDC107Q8WV48 283 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 COQ2Q96H96 371 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 MED30Q96HR3 178 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 COX4I2Q96KJ9 171 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 DNTTIP1Q9H147 329 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms