RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 KLHDC2Q9Y2U9 406 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 IGHV3-72A0A0B4J1Y9 119 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 WISP3O95389 354 aaPredicted RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 NGFRP08138 427 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 RFPL3SP0C7P2 107 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 MMDQ15546 238 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 GABRA6Q16445 453 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SPACA3Q8IXA5 215 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ARRDC1Q8N5I2 433 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 HGDQ93099 445 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 C17orf51A8MQB3 221 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 TO15178 435 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 METTL15P1P0C7V9 234 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 PDZK1IP1Q13113 114 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 TMEM41BQ5BJD5 291 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 FLYWCH2Q96CP2 140 aaKnown RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 HARBI1Q96MB7 349 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 NAA60Q9H7X0 242 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 PARP11Q9NR21 331 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 TUBG2Q9NRH3 451 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 CLCF1Q9UBD9 225 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 PCDHGA9Q9Y5G4 932 aaKnown RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 LCTP09848 1927 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 A0A0G2JMM0 328 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 A0A1W2PPB8 328 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 A0A1W2PRS3 328 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 KIR3DP1A8MWS1 328 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 DCTN6O00399 190 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 CLDN14O95500 239 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ASAH2BP0C7U1 165 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SLC38A11Q08AI6 406 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SSX1Q16384 188 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 RXFP4Q8TDU9 374 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 C10orf35Q96D05 121 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ADAT3Q96EY9 351 aaPredicted RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 ADTRPQ96IZ2 230 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 GON7Q9BXV9 100 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ASCL3Q9NQ33 180 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 LPAR3Q9UBY5 353 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ZMIZ1Q9ULJ6 1067 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 DBX1A6NMT0 343 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 GNG7O60262 68 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 CNN1P51911 297 aaKnown RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 ZNF90Q03938 601 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 FAM27E3Q08E93 113 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 GAMTQ14353 236 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 PHYHD1Q5SRE7 291 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 VWA1Q6PCB0 445 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ZNF485Q8NCK3 441 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 OR5AP2Q8NGF4 316 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SCARB1Q8WTV0 552 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 RNF133Q8WVZ7 376 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 MARC2Q969Z3 335 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SF3B6Q9Y3B4 125 aaKnown RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 VDAC1P21796 283 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 NUBP1P53384 320 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SUCLG1P53597 346 aaKnown RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 MITD1Q8WV92 249 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 LINC00052Q96N35 136 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 P2RX4Q99571 388 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 RNF122Q9H9V4 155 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 UQCC1Q9NVA1 299 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 ZDHHC8Q9ULC8 765 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SCN2AQ99250 2005 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SFT2D2O95562 160 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 IGLV3-19P01714 112 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SMIM10L1P0DMW3 83 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 GZMHP20718 246 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 CSRP1P21291 193 aaKnown RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 G6PCP35575 357 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 HLA-DRB3P79483 266 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 MGAT2Q10469 447 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 ETV3LQ6ZN32 361 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 LFNGQ8NES3 379 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SMIM10Q96HG1 83 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 EAF1Q96JC9 268 aaPredicted RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 ELOVL5Q9NYP7 299 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 KNL1Q8NG31 2342 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SPNP16150 400 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 PPP1CCP36873 323 aaKnown RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 FAM27BQ5VT28 67 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 BTNL8Q6UX41 500 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 CCDC190Q86UF4 302 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SHISA5Q8N114 240 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 ITPKCQ96DU7 683 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 GPA33Q99795 319 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 RNF24Q9Y225 148 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 PCM1Q15154 2024 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 UNC13CQ8NB66 2214 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 NKX2-6A6NCS4 301 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 F5H697 171 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 CD59P13987 128 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 FUT5Q11128 374 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 BTN1A1Q13410 526 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 PPP1R1AQ13522 171 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 CLEC12BQ2HXU8 276 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 TEX30Q5JUR7 227 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 DMKNQ6E0U4 476 aaPredicted RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 GAPTQ8N292 157 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms