RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ZNF850A8MQ14 1090 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 CA11O75493 328 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 HTR3BO95264 441 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 GABRR1P24046 479 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 LPAR6P43657 344 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 MEOX2P50222 304 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 RPP30P78346 268 aaKnown RBP9.22□□□□□ -0.93
CLIP1-210ENST00000538120 RAB32Q13637 225 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 ARFRP1Q13795 201 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 GUSBP1Q15486 140 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 PLCXD3Q63HM9 321 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 FOXRED2Q8IWF2 684 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 TERB2Q8NHR7 220 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 SFT2D1Q8WV19 159 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 RHOVQ96L33 236 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 RCC2Q9P258 522 aaKnown RBP9.22□□□□□ -0.93
CLIP1-210ENST00000538120 GPR132Q9UNW8 380 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 SDCBPO00560 298 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-210ENST00000538120 EIF3GO75821 320 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLIP1-210ENST00000538120 SERPINA5P05154 406 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 WNT5AP41221 380 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 NAAAQ02083 359 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 RSU1Q15404 277 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 TMEM128Q5BJH2 165 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 AVPI1Q5T686 147 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 LCE2AQ5TA79 106 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-210ENST00000538120 RPL7L1Q6DKI1 246 aaKnown RBP9.22□□□□□ -0.93
CLIP1-210ENST00000538120 CALHM1Q8IU99 346 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 MAFIPQ8WZ33 124 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 APOBEC3DQ96AK3 386 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-210ENST00000538120 ST6GALNAC5Q9BVH7 336 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 GSKIPQ9P0R6 139 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 TINAGQ9UJW2 476 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 SLC7A11Q9UPY5 501 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 IGKV1D-8A0A087WSZ0 117 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 SERPINE3A8MV23 424 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 AQP7O14520 342 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 SFTPBP07988 381 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 SFTA3P0C7M3 94 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 CBR1P16152 277 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 DAZAP2Q15038 168 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-210ENST00000538120 TAF9Q16594 264 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 MYO7BQ6PIF6 2116 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 P4HA3Q7Z4N8 544 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 MDP1Q86V88 176 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 C1orf162Q8NEQ5 155 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-210ENST00000538120 DMBX1Q8NFW5 382 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 TRIB1Q96RU8 372 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 ATP6V0BQ99437 205 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 PRRX2Q99811 253 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-210ENST00000538120 IL36GQ9NZH8 169 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 GAB2Q9UQC2 676 aa9.21□□□□□ -0.93
CLIP1-210ENST00000538120 A0A0U1RQK1 487 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 PQLC2LA1A4F0 135 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 ZNF320A2RRD8 509 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 COLCA2A8K830 154 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 SFT2D2O95562 160 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 ACAA1P09110 424 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-210ENST00000538120 GLRA1P23415 457 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 SNRPEP62304 92 aaKnown RBP9.21□□□□□ -0.94
CLIP1-210ENST00000538120 ACTBL2Q562R1 376 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 PRSS54Q6PEW0 395 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 RBMS3Q6XE24 437 aaKnown RBP9.21□□□□□ -0.94
CLIP1-210ENST00000538120 GCNT2Q8N0V5 402 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 HPSE2Q8WWQ2 592 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 EMG1Q92979 244 aaKnown RBP9.21□□□□□ -0.94
CLIP1-210ENST00000538120 TECTBQ96PL2 329 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 TAAR6Q96RI8 345 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 HDHD3Q9BSH5 251 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-210ENST00000538120 SLC5A7Q9GZV3 580 aa9.21□□□□□ -0.94
CLIP1-210ENST00000538120 PARP12Q9H0J9 701 aaKnown RBP9.21□□□□□ -0.94
CLIP1-210ENST00000538120 CNOT1A5YKK6 2376 aaKnown RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 RNASEK-C17orf49H0YIS7 233 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 FBXO24O75426 580 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 CST4P01036 141 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 HOXB5P09067 269 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 AMY2BP19961 511 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 IGHV1-2P23083 117 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 CD80P33681 288 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 CAV2P51636 162 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 SNU13P55769 128 aaKnown RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 S100A10P60903 97 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 PLP2Q04941 152 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 PRDX4Q13162 271 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 PIGYQ3MUY2 71 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 ARSJQ5FYB0 599 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 FAM76BQ5HYJ3 339 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 OR2A2Q6IF42 318 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 IL34Q6ZMJ4 242 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 DPPA2Q7Z7J5 298 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 OR13G1Q8NGZ3 307 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 FAAP24Q9BTP7 215 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 METTL8Q9H825 291 aaKnown RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 DECR2Q9NUI1 292 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 PLEKHJ1Q9NW61 149 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 HSF4Q9ULV5 492 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 ZFHX2Q9C0A1 2572 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 SPENQ96T58 3664 aaKnown RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 ARHGAP21Q5T5U3 1957 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms