RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 KCTD18Q6PI47 426 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 OR5AU1Q8NGC0 362 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 CLUHP3Q96NS8 147 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 P2RX4Q99571 388 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 RTBDNQ9BSG5 229 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 HIPK2Q9H2X6 1198 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 PRTFDC1Q9NRG1 225 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 LOC102724200A0A096LPH7 203 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A1B0GV72 72 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 FAM221AA4D161 298 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 NBEAP1P0C6P0 100 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 BCL2P10415 239 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 GABRA3P34903 492 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 CAPZBP47756 277 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 SCGB2A2Q13296 93 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 UNQ5815/PRO19632Q6UWF5 114 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 S100A7AQ86SG5 101 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNRF4Q8WWF5 429 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 RYDENQ9NUL5 291 aaKnown RBP9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 CEACAM18A8MTB9 384 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 HPNP05981 417 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 FOLR3P41439 243 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 CLEC12BQ2HXU8 276 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 ASB5Q8WWX0 329 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 TMEM234Q8WY98 164 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 MRPL24Q96A35 216 aaKnown RBP9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 CNRIP1Q96F85 164 aaPredicted RBP9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 HSPB9Q9BQS6 159 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 CDC42EP3Q9UKI2 254 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 MTCL1Q9Y4B5 1905 aaKnown RBP9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A0B4J2E0 115 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A1B0GX12 115 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 CLEC3AO75596 197 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNF74Q16587 644 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 SNAI3Q3KNW1 292 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 C1orf100Q5SVJ3 147 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 SLC38A9Q8NBW4 561 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 OR52R1Q8NGF1 315 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 STARD4Q96DR4 205 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 LPAR5Q9H1C0 372 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 TBC1D29Q9UFV1 150 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 TMEM8BA6NDV4 472 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 CEBPZOSA8MTT3 80 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 LYPD3O95274 346 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 FOXF1Q12946 379 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 MORN2Q502X0 79 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 LINC01590Q5TEZ4 76 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNF787Q6DD87 383 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 SLC18B1Q6NT16 456 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 OR4D6Q8NGJ1 314 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 OR2AJ1Q8NGZ0 328 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 FAM71F1Q96KD3 344 aaPredicted RBP9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 SDF2Q99470 211 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 NUDT16L1Q9BRJ7 211 aaKnown RBP9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 SLC22A13Q9Y226 551 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 PPIAL4AQ9Y536 164 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 DOCK8Q8NF50 2099 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 CSTAP01040 98 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 OTX2P32243 289 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 LCN6P62502 163 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 GNB2P62879 340 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 CCL7P80098 99 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 EWSR1Q01844 656 aaKnown RBP eCLIP9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 DCST2Q5T1A1 773 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 OR4A47Q6IF82 309 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 LGI3Q8N145 548 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 OR5D18Q8NGL1 313 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 FGF21Q9NSA1 209 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNF319Q9P2F9 582 aa9.51□□□□□ -0.89
CLSTN3-207ENST00000537408 HELZP42694 1942 aaKnown RBP9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNF878C9JN71 531 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 PITX3O75364 302 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 CLDN18P56856 261 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 TMEM95Q3KNT9 176 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 FAM90A2PQ658T7 463 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 FCRL6Q6DN72 434 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 SLC48A1Q6P1K1 146 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 NIT1Q86X76 327 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 SIGLECL1Q8N7X8 197 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 OR4D5Q8NGN0 318 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 ZPLD1Q8TCW7 415 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 STARD5Q9NSY2 213 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 CLN8Q9UBY8 286 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 MYOFQ9NZM1 2061 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 AHRRA9YTQ3 701 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 IFNA5P01569 189 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 CTXN2P0C2S0 81 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 ARR3P36575 388 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 DCAF7P61962 342 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 SQSTM1Q13501 440 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 NNATQ16517 81 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 MEP1BQ16820 701 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 TPTE2P1Q5T6R2 138 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 FAM180AQ6UWF9 173 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 TMEM108Q6UXF1 575 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 SLC22A24Q8N4F4 322 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 OR2M7Q8NG81 312 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms