RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 PSMB9P28065 219 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ELK4P28324 431 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 RPA3P35244 121 aaPredicted RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SPAM1P38567 509 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 RANBP1P43487 201 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SLC18A1P54219 525 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 MLF1P58340 268 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TSPAN5P62079 268 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 VSNL1P62760 191 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 GRB2P62993 217 aaKnown RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TNNC1P63316 161 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SS18Q15532 418 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TAL2Q16559 108 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 C18orf21Q32NC0 220 aaPredicted RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 Q3ZCU0 254 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TTMPQ5BVD1 217 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 CLEC12AQ5QGZ9 265 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 FAM27D1Q5T7N8 215 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 AADACL4Q5VUY2 407 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 RESP18Q5W5W9 173 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ASCL4Q6XD76 172 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 FAM231DQ6ZW35 169 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TRMT10CQ7L0Y3 403 aaKnown RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 CYP4Z1Q86W10 505 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 RBM45Q8IUH3 476 aaKnown RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 NELFCDQ8IXH7 590 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SYS1Q8N2H4 156 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 RPRMLQ8N4K4 120 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SPERTQ8NA61 448 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 CYB561A3Q8NBI2 242 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 OR4A15Q8NGL6 344 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 NDNFQ8TB73 568 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 UBA3Q8TBC4 463 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 LGALS14Q8TCE9 139 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TMEM239Q8WW34 195 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 CDKL2Q92772 493 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ZNF707Q96C28 371 aaPredicted RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 CCDC124Q96CT7 223 aaKnown RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SMIM8Q96KF7 97 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 UBE2E2Q96LR5 201 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ZNF396Q96N95 335 aaPredicted RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 METTL26Q96S19 204 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 VAT1Q99536 393 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 GABRG3Q99928 467 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TMED9Q9BVK6 235 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 MAP1LC3CQ9BXW4 147 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 MRPL20Q9BYC9 149 aaKnown RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TTTY12Q9BZ98 90 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 RAB1BQ9H0U4 201 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SLC38A1Q9H2H9 487 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SND1-IT1Q9HBX3 110 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ANKHQ9HCJ1 492 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ABCB9Q9NP78 766 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 C12orf4Q9NQ89 552 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 DIABLOQ9NR28 239 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TUBG2Q9NRH3 451 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SDHAF3Q9NRP4 125 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 RBM22Q9NW64 420 aaKnown RBP eCLIP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 DNAJC27Q9NZQ0 273 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 CHMP5Q9NZZ3 219 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ZMAT5Q9UDW3 170 aaKnown RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ZNF443Q9Y2A4 671 aaPredicted RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ORC6Q9Y5N6 252 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ZNF780BQ9Y6R6 833 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 ENPP4Q9Y6X5 453 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 USP42Q9H9J4 1324 aaKnown RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 CELSR1Q9NYQ6 3014 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 SETBP1Q9Y6X0 1596 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TRPM6Q9BX84 2022 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 CCDC88CQ9P219 2028 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 PDE4DIPQ5VU43 2346 aa0.52□□□□□ -2.33
LINC02398-201ENST00000536666 TLN1Q9Y490 2541 aaKnown RBP0.52□□□□□ -2.33
LINC02398-201ENST00000536666 A0A0B4J2C4 111 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 MGAT4DA6NG13 374 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 OR2AT4A6NND4 320 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 K7ERQ8 282 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 UPK1AO00322 258 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 PLPP3O14495 311 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 CHD2O14647 1828 aaKnown RBP0.51□□□□□ -2.33
LINC02398-201ENST00000536666 UBDO15205 165 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 RNF113AO15541 343 aaKnown RBP0.51□□□□□ -2.33
LINC02398-201ENST00000536666 CRXO43186 299 aaPredicted RBP0.51□□□□□ -2.33
LINC02398-201ENST00000536666 COX7A2P2O60397 106 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 NEMFO60524 1076 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 OR2A4O95047 310 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 ELP1O95163 1332 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 FADS2O95864 444 aaKnown RBP0.51□□□□□ -2.33
LINC02398-201ENST00000536666 PTTG1O95997 202 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 KRTAP2-3P0C7H8 128 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 SEC11BP0C7V7 166 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 CECR9P0C854 216 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 PTHLHP12272 177 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 MLNP12872 115 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 CCL2P13500 99 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 HIVEP1P15822 2718 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 CD9P21926 228 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 PRTN3P24158 256 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 IL12BP29460 328 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 GTF2H1P32780 548 aa0.51□□□□□ -2.33
LINC02398-201ENST00000536666 P2RY2P41231 377 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms