RNA–Protein interactions for RNA: ENST00000535954.1

C2CD3-209, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-209ENST00000535954 NHLRC3Q5JS37 347 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 PRAMEF5Q5TYX0 476 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 RSBN1Q5VWQ0 802 aaPredicted RBP7.1□□□□□ -1.27
C2CD3-209ENST00000535954 LIAT1Q6ZQX7 453 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 TMEM219Q86XT9 240 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 ABHD12Q8N2K0 398 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 CHST4Q8NCG5 386 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 OR13A1Q8NGR1 328 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 OR52N1Q8NH53 320 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 NRG4Q8WWG1 115 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 TFAP2CQ92754 450 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 TMEM106AQ96A25 262 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 OCSTAMPQ9BR26 566 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 IFT22Q9H7X7 185 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 C8orf4Q9NR00 106 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 IL36GQ9NZH8 169 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 GLS2Q9UI32 602 aa7.1□□□□□ -1.27
C2CD3-209ENST00000535954 EXOSC1Q9Y3B2 195 aaKnown RBP7.1□□□□□ -1.27
C2CD3-209ENST00000535954 TRGV10A0A0A0MS01 117 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 KBTBD11-OT1A0A1B0GTJ5 212 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A18PA6NE21 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A16PA6NEW6 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A20PA6NIJ5 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A9PA6NNJ1 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A12PA8MX19 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A5PA8MXJ8 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 H0YJX3 145 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 BUB1B-PAK6H3BSN5 160 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 TIMM23O14925 209 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 CD1AP06126 327 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A15PP0C7V4 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A13PP0C7W8 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A14PP0C7W9 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM90A24PP0C7X0 464 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 CD37P11049 281 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 CAPGP40121 348 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 DEFA6Q01524 100 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 DYNC1I2Q13409 638 aaKnown RBP7.09□□□□□ -1.27
C2CD3-209ENST00000535954 IL13RA2Q14627 380 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 ATXN7L3Q14CW9 347 aaPredicted RBP7.09□□□□□ -1.27
C2CD3-209ENST00000535954 HERPUD1Q15011 391 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 KRBOX4Q5JUW0 171 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 FAM53AQ6NSI3 398 aaPredicted RBP7.09□□□□□ -1.27
C2CD3-209ENST00000535954 UNQ9370/PRO34162Q6UXP9 181 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 TMPRSS11AQ6ZMR5 421 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 RTN4RL2Q86UN3 420 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 NANOGP1Q8N7R0 232 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 ZFP41Q8N8Y5 198 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 TNFAIP8L1Q8WVP5 186 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 TSEN15Q8WW01 171 aaKnown RBP7.09□□□□□ -1.27
C2CD3-209ENST00000535954 STMN2Q93045 179 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 KIRREL1Q96J84 757 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 NR1H4Q96RI1 486 aaPredicted RBP7.09□□□□□ -1.27
C2CD3-209ENST00000535954 CLEC7AQ9BXN2 247 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 MMP27Q9H306 513 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 TMEM138Q9NPI0 162 aa7.09□□□□□ -1.27
C2CD3-209ENST00000535954 CNOT2Q9NZN8 540 aaKnown RBP7.09□□□□□ -1.27
C2CD3-209ENST00000535954 TRAV39A0A0B4J263 110 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 FAM172BPA6NC97 362 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 ZNF729A6NN14 1252 aaPredicted RBP7.08□□□□□ -1.28
C2CD3-209ENST00000535954 C15orf65H3BRN8 121 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 M0QZ24 198 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 GEMIN2O14893 280 aaKnown RBP7.08□□□□□ -1.28
C2CD3-209ENST00000535954 OCM2P0CE71 109 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 CD24P25063 80 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 HTR1DP28221 377 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 BDKRB2P30411 391 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 ZNF93P35789 620 aaPredicted RBP7.08□□□□□ -1.28
C2CD3-209ENST00000535954 DIAPH2-AS1Q14236 149 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 HLA-DRB5Q30154 266 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 Q499Y3 187 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 RNLSQ5VYX0 342 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 OR52W1Q6IF63 320 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 SATL1Q86VE3 508 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 KLHDC1Q8N7A1 406 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 SUMF2Q8NBJ7 301 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 SETD9Q8NE22 299 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 SGCDQ92629 289 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 FOXRED1Q96CU9 486 aaPredicted RBP7.08□□□□□ -1.28
C2CD3-209ENST00000535954 NEK6Q9HC98 313 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 RAB18Q9NP72 206 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 PAK1IP1Q9NWT1 392 aaPredicted RBP7.08□□□□□ -1.28
C2CD3-209ENST00000535954 ING3Q9NXR8 418 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 DPM3Q9P2X0 92 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 KIF25Q9UIL4 384 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 ING4Q9UNL4 249 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 ST3GAL6Q9Y274 331 aa7.08□□□□□ -1.28
C2CD3-209ENST00000535954 LSM2Q9Y333 95 aaKnown RBP7.08□□□□□ -1.28
C2CD3-209ENST00000535954 A0A1W2PPK0 400 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 IRGMA1A4Y4 181 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 FUOMA2VDF0 154 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 EFCAB10A6NFE3 127 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 HTR3BO95264 441 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 OCMP0CE72 109 aaPredicted RBP7.07□□□□□ -1.28
C2CD3-209ENST00000535954 CD28P10747 220 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 FSTP19883 344 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 RBM11P57052 281 aaKnown RBP7.07□□□□□ -1.28
C2CD3-209ENST00000535954 INSL4Q14641 139 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 IRF3Q14653 427 aa7.07□□□□□ -1.28
C2CD3-209ENST00000535954 PDLIM3Q53GG5 364 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms