RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 AIFM2Q9BRQ8 373 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 SUCNR1Q9BXA5 334 aa11.43□□□□□ -0.58
VPS33B-202ENST00000535906 RCC2Q9P258 522 aaKnown RBP11.43□□□□□ -0.58
VPS33B-202ENST00000535906 JTBO76095 146 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 NAPSAO96009 420 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 PRKACAP17612 351 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 RCC1P18754 421 aaPredicted RBP11.42□□□□□ -0.58
VPS33B-202ENST00000535906 SULT1A2P50226 295 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 TBC1D28Q2M2D7 210 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 FAM214BQ7L5A3 538 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 OR11L1Q8NGX0 322 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 HRH4Q9H3N8 390 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 PLEKHA2Q9HB19 425 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 TREM1Q9NP99 234 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 UQCC1Q9NVA1 299 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 FBXL17Q9UF56 701 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 PRELID1Q9Y255 219 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 AMDHD2Q9Y303 409 aa11.42□□□□□ -0.58
VPS33B-202ENST00000535906 LSM5Q9Y4Y9 91 aaKnown RBP11.42□□□□□ -0.58
VPS33B-202ENST00000535906 CAV2P51636 162 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 UCP3P55916 312 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 TMEM33P57088 247 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 GNG3P63215 75 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 TSC22D1Q15714 1073 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 DEFB109BQ30KR1 87 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 LDLRAD3Q86YD5 345 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 C17orf78Q8N4C9 275 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 SEC11CQ9BY50 192 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 Q9N2K0 584 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 GLRX2Q9NS18 164 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 LHX6Q9UPM6 363 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 TRAV17A0A0B4J275 112 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 MED6O75586 246 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 RHBDL1O75783 438 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 PPYP01298 95 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 SCTP09683 121 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 GLP1RP43220 463 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 IDH3GP51553 393 aaPredicted RBP11.41□□□□□ -0.58
VPS33B-202ENST00000535906 ERVS71-1P61550 626 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 TGFBR3Q03167 851 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 GUSBP1Q15486 140 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 LIAT1Q6ZQX7 453 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 ZNF573Q86YE8 665 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 SYT3Q9BQG1 590 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 OR2J1Q9GZK6 312 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 TLNRD1Q9H1K6 362 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 RHOFQ9HBH0 211 aa11.41□□□□□ -0.58
VPS33B-202ENST00000535906 OR5B21A6NL26 309 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 E5RGE8 158 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 PRSS44E7EML9 344 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 SMPD2O60906 423 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 SCGB1D2O95969 90 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 MBPP02686 304 aaPredicted RBP11.4□□□□□ -0.58
VPS33B-202ENST00000535906 LPAR6P43657 344 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 UBE2NP61088 152 aaKnown RBP11.4□□□□□ -0.58
VPS33B-202ENST00000535906 TCF15Q12870 199 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 Q6ZS49 121 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 CNEP1R1Q8N9A8 125 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 GLYATL2Q8WU03 294 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 C18orf12Q96KH6 178 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 RSRP1Q9BUV0 290 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 OR51I2Q9H344 312 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 TMEM231Q9H6L2 316 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 FAM86C1Q9NVL1 165 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 NSG2Q9Y328 171 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 RIF1Q5UIP0 2472 aaKnown RBP11.4□□□□□ -0.58
VPS33B-202ENST00000535906 H7C1Q1 480 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 H2AFB1P0C5Y9 115 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 HERV-K104P61576 105 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 IL24Q13007 206 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 HERPUD1Q15011 391 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 GABRA6Q16445 453 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 IGF2-ASQ6U949 168 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 FBXW12Q6X9E4 464 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 Q6ZT83 130 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 LYZL2Q7Z4W2 148 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 UBAC2Q8NBM4 344 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 NEK7Q8TDX7 302 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 WNT2BQ93097 391 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 MSI2Q96DH6 328 aaKnown RBP11.4□□□□□ -0.58
VPS33B-202ENST00000535906 PARP11Q9NR21 331 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
VPS33B-202ENST00000535906 PRR14LQ5THK1 2151 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 AQP7O14520 342 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 HS3ST1O14792 307 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 TSPAN9O75954 239 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 SNAPINO95295 136 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 KIR2DL2P43627 348 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-202ENST00000535906 PPP1CBP62140 327 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 SRSF7Q16629 238 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS33B-202ENST00000535906 VWA1Q6PCB0 445 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 BTNL8Q6UX41 500 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 C20orf204Q6ZNR8 217 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 SPAG16Q8N0X2 631 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 C9orf106Q8NAJ2 232 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 SUMF2Q8NBJ7 301 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 NRIP2Q9BQI9 281 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 ZFP57Q9NU63 452 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 FBXO24O75426 580 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms