RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ATP6V0E1O15342 81 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 SOX15O60248 233 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 SELENOFO60613 162 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 ENTPD6O75354 484 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 MOSP00540 346 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 NPPAP01160 153 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 HSPB1P04792 205 aaKnown RBP6.27□□□□□ -1.41
CLIP1-206ENST00000535290 NCK1P16333 377 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 NUDT2P50583 147 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 ZNF816Q0VGE8 651 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-206ENST00000535290 ZNF146Q15072 292 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 LTC4SQ16873 150 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 TM4SF20Q53R12 229 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 DEFB125Q8N687 156 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 MINDY2Q8NBR6 621 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 TMEM104Q8NE00 496 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 OR10X1Q8NGY0 326 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 GNPDA2Q8TDQ7 276 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 ANP32BQ92688 251 aaKnown RBP6.27□□□□□ -1.41
CLIP1-206ENST00000535290 FLYWCH2Q96CP2 140 aaKnown RBP6.27□□□□□ -1.41
CLIP1-206ENST00000535290 WDR89Q96FK6 387 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-206ENST00000535290 COQ2Q96H96 371 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 LRGUKQ96M69 825 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 WFDC10AQ9H1F0 79 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 IL20Q9NYY1 176 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 OR6C3Q9NZP0 311 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 HSPG2P98160 4391 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-206ENST00000535290 TRAV41A0A0B4J266 112 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 FUOMA2VDF0 154 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 ACOD1A6NK06 481 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 GSTA4O15217 222 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 GADD45GO95257 159 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 OR2H2O95918 312 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 GAPDHP04406 335 aaKnown RBP6.26□□□□□ -1.41
CLIP1-206ENST00000535290 BCL3P20749 454 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 HCCSP53701 268 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 CDC42P60953 191 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 LIPEQ05469 1076 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 C21orf62-AS1Q17RA5 79 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 COQ5Q5HYK3 327 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 KRBOX4Q5JUW0 171 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 LINC00336Q6ZUF6 198 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 SLC15A3Q8IY34 581 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 ENTHD1Q8IYW4 607 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 FAM58AQ8N1B3 248 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 OR8H1Q8NGG4 311 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 OR14K1Q8NGZ2 314 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 RFESDQ8TAC1 157 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 RGP1Q92546 391 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-206ENST00000535290 TSSK6Q9BXA6 273 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 OSBPL10Q9BXB5 764 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 PPIL3Q9H2H8 161 aaKnown RBP6.26□□□□□ -1.41
CLIP1-206ENST00000535290 ZCCHC4Q9H5U6 513 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 PARP11Q9NR21 331 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 COPS3Q9UNS2 423 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 FBXO7Q9Y3I1 522 aa6.26□□□□□ -1.41
CLIP1-206ENST00000535290 TRBV2A0A0J9YWF9 115 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 A0A1B0GTI1 187 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 PRR32B1ATL7 298 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 TPPPO94811 219 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 TTRP02766 147 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 TFAP2AP05549 437 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 CD7P09564 240 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 PRKACAP17612 351 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 ALOX5APP20292 161 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 FASP25445 335 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 CD1BP29016 333 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 IFNGR2P38484 337 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 SMIM11AP58511 58 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 CD81P60033 236 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 MAGOHP61326 146 aaKnown RBP6.25□□□□□ -1.41
CLIP1-206ENST00000535290 RAB40BQ12829 278 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 BNIP1Q12981 228 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 UBE2V2Q15819 145 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 XP32Q5T750 250 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 RPL13AP3Q6NVV1 102 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 OR13A1Q8NGR1 328 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 RP9Q8TA86 221 aaKnown RBP6.25□□□□□ -1.41
CLIP1-206ENST00000535290 FAM162AQ96A26 154 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 OTULINQ96BN8 352 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 NEURL2Q9BR09 285 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 OR51V1Q9H2C8 321 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 SRD5A3Q9H8P0 318 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 CALYQ9NYX4 217 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 IDI2-AS1Q9NZ38 188 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 NUFIP1Q9UHK0 495 aaKnown RBP6.25□□□□□ -1.41
CLIP1-206ENST00000535290 GSTK1Q9Y2Q3 226 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 V9GYS6 101 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 UBR4Q5T4S7 5183 aa6.25□□□□□ -1.41
CLIP1-206ENST00000535290 IGHV7-81A0A0B4J1V7 117 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 A0A1W2PN81 502 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 RIIAD1A6NNX1 92 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 SH2D1BO14796 132 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 IFNGP01579 166 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 IL1AP01583 271 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 BLVRBP30043 206 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-206ENST00000535290 HTR1FP30939 366 aa6.24□□□□□ -1.41
CLIP1-206ENST00000535290 CHRNA7P36544 502 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms