RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 HLA-DRB5Q30154 266 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 CCDC58Q4VC31 144 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 KLHL22Q53GT1 634 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 KRBOX4Q5JUW0 171 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 TRAPPC6BQ86SZ2 158 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 NDUFA11Q86Y39 141 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 OR4F17Q8NGA8 305 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 NDNFQ8TB73 568 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 ZNF596Q8TC21 504 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 OR4F4Q96R69 305 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 B9D2Q9BPU9 175 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 PPIL3Q9H2H8 161 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 ZNF286AQ9HBT8 521 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 NEK6Q9HC98 313 aa8.04□□□□□ -1.12
CLSTN3-203ENST00000534830 KBTBD11-OT1A0A1B0GTJ5 212 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A18PA6NE21 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A16PA6NEW6 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A20PA6NIJ5 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 ZNF729A6NN14 1252 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A9PA6NNJ1 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A12PA8MX19 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A5PA8MXJ8 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 LEUTXA8MZ59 168 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 C3orf84H3BNL1 204 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 BUB1B-PAK6H3BSN5 160 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 F2RL2O00254 374 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 DEGS1O15121 323 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 OGG1O15527 345 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 AMY1AP04745 511 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 AMY2AP04746 511 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 HCKP08631 526 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A15PP0C7V4 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A13PP0C7W8 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A14PP0C7W9 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 FAM90A24PP0C7X0 464 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 OCM2P0CE71 109 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 OCMP0CE72 109 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 TMEM225BP0DP42 221 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 ETV1P50549 477 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 CD83Q01151 205 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 SCN1BQ07699 218 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 IL13RA2Q14627 380 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 SMN1Q16637 294 aaKnown RBP8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 XAF1Q6GPH4 301 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 RPL22L1Q6P5R6 122 aaKnown RBP8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 OR51A2Q8NGJ7 313 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 CNIH3Q8TBE1 160 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 RDH12Q96NR8 316 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 RBM14Q96PK6 669 aaKnown RBP8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 CITED2Q99967 270 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 IFT22Q9H7X7 185 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 LIN7BQ9HAP6 207 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 OR6C3Q9NZP0 311 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 DHDHQ9UQ10 334 aa8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 SIRT4Q9Y6E7 314 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-203ENST00000534830 NPIPB11E5RHQ5 1161 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 H0YJX3 145 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 GABRPO00591 440 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 RAB3AP20336 220 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 DCKP27707 260 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 PTGFRP43088 359 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 VDAC2P45880 294 aaPredicted RBP8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 ATXN7L3Q14CW9 347 aaPredicted RBP8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 TMEM95Q3KNT9 176 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 NHLRC3Q5JS37 347 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 TPTE2P1Q5T6R2 138 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 RSBN1Q5VWQ0 802 aaPredicted RBP8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 ZNF485Q8NCK3 441 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 OR4D6Q8NGJ1 314 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 OR13A1Q8NGR1 328 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 CREB3L1Q96BA8 519 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 KIRREL1Q96J84 757 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 TAS2R4Q9NYW5 299 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 IL36GQ9NZH8 169 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 U3KQK5 164 aa8.02□□□□□ -1.13
CLSTN3-203ENST00000534830 TRBV5-5A0A0J9YX44 114 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 FAM172BPA6NC97 362 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 OOSP1A8MZH6 123 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 GPX5O75715 221 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 OR2F2O95006 317 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 IGFBP3P17936 291 aaPredicted RBP8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 CD24P25063 80 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 BRS3P32247 399 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 KCNJ3P48549 501 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 PRRX1P54821 245 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 ZSCAN26Q16670 478 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 PIGYQ3MUY2 71 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 TCTEX1D4Q5JR98 221 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 OR2G6Q5TZ20 316 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 THNSL2Q86YJ6 484 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 ZNF565Q8N9K5 539 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 WFDC9Q8NEX5 89 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 OR9G1Q8NH87 305 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 PLPPR1Q8TBJ4 325 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 GPR148Q8TDV2 347 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 TSEN15Q8WW01 171 aaKnown RBP8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 TMEM106AQ96A25 262 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 CPNE2Q96FN4 548 aaPredicted RBP8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 SLC25A33Q9BSK2 321 aa8.01□□□□□ -1.13
CLSTN3-203ENST00000534830 SMPD3Q9NY59 655 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms