RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 RPP14O95059 124 aaKnown RBP9.35□□□□□ -0.91
CTNND1-238ENST00000534647 MYL9P24844 172 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 S100A5P33763 92 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 LOXL3P58215 753 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 GMFBP60983 142 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 GNG3P63215 75 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 ROM1Q03395 351 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 CEACAM21Q3KPI0 293 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 KHDC1LQ5JSQ8 128 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 STEAP3Q658P3 488 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 DMKNQ6E0U4 476 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-238ENST00000534647 CALHM1Q8IU99 346 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 ZDHHC23Q8IYP9 409 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 OR5A2Q8NGI9 324 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 WIPF2Q8TF74 440 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-238ENST00000534647 AQP3Q92482 292 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 PIGCQ92535 297 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 GHSRQ92847 366 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 OR8B4Q96RC9 309 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 MROQ9BYG7 248 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 C6orf62Q9GZU0 229 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-238ENST00000534647 COMMD4Q9H0A8 199 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 KLHDC2Q9Y2U9 406 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 PLXNB1O43157 2135 aa9.35□□□□□ -0.91
CTNND1-238ENST00000534647 A0A0U1RQV5 110 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 hCG_1809904A0A1W2PP81 198 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 A0A1W2PPE2 198 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 A0A1W2PR64 198 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 A0A1W2PRV1 198 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 OR5B21A6NL26 309 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 PSMD9O00233 223 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 MAGEB4O15481 346 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-238ENST00000534647 ANGPTL7O43827 346 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 CHST1O43916 411 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 ZNF254O75437 659 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 TFF1P04155 84 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 GABRA2P47869 451 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 GPM6AP51674 278 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 RIDAP52758 137 aaKnown RBP9.34□□□□□ -0.91
CTNND1-238ENST00000534647 ALKBH1Q13686 389 aaKnown RBP9.34□□□□□ -0.91
CTNND1-238ENST00000534647 ZNF846Q147U1 533 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 LY6EQ16553 131 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 TMEM200BQ69YZ2 307 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 CEACAM19Q7Z692 300 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 NDUFA11Q86Y39 141 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 MKXQ8IYA7 352 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 ZNF679Q8IYX0 411 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 ZNF561Q8N587 486 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 OR4S1Q8NGB4 309 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 EDARADDQ8WWZ3 215 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 AP3S1Q92572 193 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 CEP19Q96LK0 163 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 SLIRPQ9GZT3 109 aaKnown RBP9.34□□□□□ -0.91
CTNND1-238ENST00000534647 PLGRKTQ9HBL7 147 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 HMG20AQ9NP66 347 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 C19orf12Q9NSK7 152 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 SERTAD4Q9NUC0 356 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 NECAP2Q9NVZ3 263 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 MRM2Q9UI43 246 aaKnown RBP9.34□□□□□ -0.91
CTNND1-238ENST00000534647 PEX16Q9Y5Y5 336 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 SIRT4Q9Y6E7 314 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-238ENST00000534647 NOTCH3Q9UM47 2321 aa9.34□□□□□ -0.91
CTNND1-238ENST00000534647 ZNF732B4DXR9 585 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 NOS1APO75052 506 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-238ENST00000534647 GATBO75879 557 aaKnown RBP9.33□□□□□ -0.92
CTNND1-238ENST00000534647 ARL6IP5O75915 188 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 SDC2P34741 201 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 RPS19P39019 145 aaKnown RBP9.33□□□□□ -0.92
CTNND1-238ENST00000534647 MXD1Q05195 221 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 DCTN2Q13561 401 aaKnown RBP9.33□□□□□ -0.92
CTNND1-238ENST00000534647 ACSM3Q53FZ2 586 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 ZNF684Q5T5D7 378 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 DEGS2Q6QHC5 323 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 ACP7Q6ZNF0 438 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 FAM185AQ8N0U4 392 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 C11orf44Q8N8P7 122 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 WFDC9Q8NEX5 89 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 TMEM185AQ8NFB2 350 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 OR4F17Q8NGA8 305 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 OR8B12Q8NGG6 310 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 OR6Q1Q8NGQ2 317 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 OR5AK2Q8NH90 309 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 PHYHIPQ92561 330 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 THRSPQ92748 146 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 SLC25A46Q96AG3 418 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 PGLYRP3Q96LB9 341 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 OR4F4Q96R69 305 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 ZNF702PQ9H963 129 aa9.33□□□□□ -0.92
CTNND1-238ENST00000534647 ELL3Q9HB65 397 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-238ENST00000534647 A0A075B6Q4 140 aa9.32□□□□□ -0.92
CTNND1-238ENST00000534647 TMEM212A6NML5 194 aa9.32□□□□□ -0.92
CTNND1-238ENST00000534647 PRR32B1ATL7 298 aa9.32□□□□□ -0.92
CTNND1-238ENST00000534647 PRB2P02812 416 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-238ENST00000534647 VSIG10L2P0DP72 767 aa9.32□□□□□ -0.92
CTNND1-238ENST00000534647 FAHP16930 419 aa9.32□□□□□ -0.92
CTNND1-238ENST00000534647 MAPK3P27361 379 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-238ENST00000534647 PRDX2P32119 198 aa9.32□□□□□ -0.92
CTNND1-238ENST00000534647 DYNLT3P51808 116 aa9.32□□□□□ -0.92
CTNND1-238ENST00000534647 ERVFRD-1P60508 538 aa9.32□□□□□ -0.92
CTNND1-238ENST00000534647 RPL31P62899 125 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms