RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 Q6ZSR3 168 aa12.49□□□□□ -0.41
RPS3-220ENST00000534555 C8orf59Q8N0T1 100 aaPredicted RBP12.49□□□□□ -0.41
RPS3-220ENST00000534555 CNIH3Q8TBE1 160 aa12.49□□□□□ -0.41
RPS3-220ENST00000534555 VCX3BQ9H321 246 aa12.49□□□□□ -0.41
RPS3-220ENST00000534555 RBFOX1Q9NWB1 397 aaKnown RBP12.49□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A18PA6NE21 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A16PA6NEW6 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A20PA6NIJ5 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 LINC01548A6NM66 108 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A9PA6NNJ1 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 DHRS7CA6NNS2 312 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A12PA8MX19 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A5PA8MXJ8 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 J3QLW9 94 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 SIRPB1O00241 398 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 TOR1AO14656 332 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A15PP0C7V4 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A13PP0C7W8 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A14PP0C7W9 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM90A24PP0C7X0 464 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 FAM106CPP0CH98 169 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 ZNF19P17023 458 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 BCL3P20749 454 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 CD34P28906 385 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 ERP29P30040 261 aaKnown RBP12.48□□□□□ -0.41
RPS3-220ENST00000534555 SLC6A1P30531 599 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 CEACAM3P40198 252 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 MNDAP41218 407 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 GLIPR1P48060 266 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 HNF4GQ14541 408 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 SMN1Q16637 294 aaKnown RBP12.48□□□□□ -0.41
RPS3-220ENST00000534555 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 C5orf56Q8N8D9 126 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 CCDC54Q8NEL0 328 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 OR52I1Q8NGK6 324 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 GAL3ST2Q9H3Q3 398 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 SEBOXQ9HB31 216 aaPredicted RBP12.48□□□□□ -0.41
RPS3-220ENST00000534555 SCOCQ9UIL1 159 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 MYRFQ9Y2G1 1151 aa12.48□□□□□ -0.41
RPS3-220ENST00000534555 TRGV10A0A0A0MS01 117 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 H0YJX3 145 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 SYT7O43581 403 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 UBCP0CG48 685 aaKnown RBP12.47□□□□□ -0.41
RPS3-220ENST00000534555 CCL1P22362 96 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 CHATP28329 748 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 FUT6P51993 359 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 PRRX1P54821 245 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 AESQ08117 197 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 MRPL28Q13084 256 aaKnown RBP12.47□□□□□ -0.41
RPS3-220ENST00000534555 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 SYS1Q8N2H4 156 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 PRSS35Q8N3Z0 413 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 OR56B4Q8NH76 319 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 CORO2AQ92828 525 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 C4orf36Q96KX1 117 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 JAM3Q9BX67 310 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 PLEKHA1Q9HB21 404 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 FGF20Q9NP95 211 aaPredicted RBP12.47□□□□□ -0.41
RPS3-220ENST00000534555 ERVK13-1Q9NX77 482 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 ING3Q9NXR8 418 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 TAS2R3Q9NYW6 316 aa12.47□□□□□ -0.41
RPS3-220ENST00000534555 LCE6AA0A183 80 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 RPLP1P05386 114 aaKnown RBP12.46□□□□□ -0.41
RPS3-220ENST00000534555 HTR1AP08908 422 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 GNAO1P09471 354 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 PRKACAP17612 351 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 DCKP27707 260 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 GP2P55259 537 aaKnown RBP12.46□□□□□ -0.41
RPS3-220ENST00000534555 SLC35B1P78383 322 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 DIAPH2-AS1Q14236 149 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 HES1Q14469 280 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 CCDC144NLQ6NUI1 221 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 FDX2Q6P4F2 183 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 SLC35E3Q7Z769 313 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 THNSL2Q86YJ6 484 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 SBSPONQ8IVN8 264 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 STPG2Q8N412 459 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 DRAM1Q8N682 238 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 Q8NFD4 153 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 OR5M8Q8NGP6 311 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 OR2G2Q8NGZ5 317 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 HAVCR2Q8TDQ0 301 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 NRG4Q8WWG1 115 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 CREB3L1Q96BA8 519 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 PELI1Q96FA3 418 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 BORCS8Q96FH0 119 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 RCHY1Q96PM5 261 aa12.46□□□□□ -0.41
RPS3-220ENST00000534555 DNAH1Q9P2D7 4330 aa12.46□□□□□ -0.42
RPS3-220ENST00000534555 LOC107986453A0A1B0GWG9 222 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 OOSP1A8MZH6 123 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 SEC14L6B5MCN3 397 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 OR2H2O95918 312 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 IGHV3-7P01780 117 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 TMEM11P17152 192 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 MYL12AP19105 171 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 NFYBP25208 207 aa12.45□□□□□ -0.42
RPS3-220ENST00000534555 KIR3DL2P43630 455 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms