RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CENPSQ8N2Z9 138 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 BPIFB6Q8NFQ5 453 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 OR11H1Q8NG94 326 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 OR56B2PQ8NGI1 322 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 OR1N2Q8NGR9 330 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 OR13C2Q8NGS9 318 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 OR4Q3Q8NH05 313 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 OR8S1Q8NH09 359 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 CANT1Q8WVQ1 401 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TMEM239Q8WW34 195 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 GTF2H4Q92759 462 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 DLX4Q92988 240 aaPredicted RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 OTULINQ96BN8 352 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SGK3Q96BR1 496 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TAMM41Q96BW9 452 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ASB9Q96DX5 294 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 RBM14Q96PK6 669 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 PITX2Q99697 317 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 CHCHD6Q9BRQ6 235 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF426Q9BUY5 554 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 TMED9Q9BVK6 235 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 NAA50Q9GZZ1 169 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ALX4Q9H161 411 aaPredicted RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SYT4Q9H2B2 425 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 GNB4Q9HAV0 340 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 PNRC2Q9NPJ4 139 aaKnown RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ZFP57Q9NU63 452 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 AIG1Q9NVV5 245 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SMPD3Q9NY59 655 aaPredicted RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 NLKQ9UBE8 527 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF222Q9UK12 451 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 PITPNC1Q9UKF7 332 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SH3GLB1Q9Y371 365 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 SORL1Q92673 2214 aa2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 DMBT1Q9UGM3 2413 aaPredicted RBP2.27□□□□□ -2.05
CHMP4A-208ENST00000534106 LINC00854A0A1B0GVQ3 168 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PRSS37A4D1T9 235 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 CXorf65A6NEN9 183 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PRORSD1PA6NEY8 169 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 RFPL4AA6NLU0 287 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF850A8MQ14 1090 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 C17orf98A8MV24 154 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 C12orf77C9JDV5 145 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PTGES3LE9PB15 166 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 RFPL4AL1F8VTS6 287 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 H3BMQ9 156 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 BHLHE40O14503 412 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 CDC42EP2O14613 210 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 KHDRBS3O75525 346 aaKnown RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 OR2F2O95006 317 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 OR5F1O95221 314 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 IL6P05231 212 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 TFAP2AP05549 437 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PGA5P0DJD9 388 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 IGHV1-8P0DP01 117 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 DBTP11182 482 aaKnown RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 IFI30P13284 250 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ARSBP15848 533 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF182P17025 639 aaPredicted RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PAICSP22234 425 aaKnown RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 FMO3P31513 532 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PRDX2P32119 198 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 NAA10P41227 235 aaPredicted RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 MAP2K4P45985 399 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 OR1E2P47887 323 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 SERPINB10P48595 397 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 POU3F4P49335 361 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 POLR2JP52435 117 aaKnown RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 CRYBA2P53672 197 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 CAV3P56539 151 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 MTPNP58546 118 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 LSM6P62312 80 aaKnown RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ACTA2P62736 377 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 GNB1P62873 340 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ACTG2P63267 376 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ACTC1P68032 377 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ACTA1P68133 377 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 FAM3AP98173 230 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PPP1R8Q12972 351 aaKnown RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 MADCAM1Q13477 382 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 AQP6Q13520 282 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 DGCR6Q14129 220 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 KIAA0141Q14154 515 aaPredicted RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 DIAPH2-AS1Q14236 149 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF846Q147U1 533 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 TBCEQ15813 527 aaPredicted RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ATP6AP1Q15904 470 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 RFX4Q33E94 735 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 KLHL12Q53G59 568 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PAGE3Q5JUK9 113 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 RSBN1Q5VWQ0 802 aaPredicted RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 RNLSQ5VYX0 342 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 GPR139Q6DWJ6 353 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF770Q6IQ21 691 aaPredicted RBP2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 PLBD1Q6P4A8 553 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF773Q6PK81 442 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 TCF23Q7RTU1 214 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF429Q86V71 674 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 SNX29P2Q8IUI4 249 aa2.26□□□□□ -2.05
CHMP4A-208ENST00000534106 ZDHHC23Q8IYP9 409 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms