RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 GAMTQ14353 236 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HLA-DRB5Q30154 266 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TMEM255AQ5JRV8 349 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 FFAR4Q5NUL3 377 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 LHX8Q68G74 356 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 ASCL4Q6XD76 172 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 D2HGDHQ8N465 521 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TMEM37Q8WXS4 190 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TMEM230Q96A57 120 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TIMP4Q99727 224 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 RNF126Q9BV68 326 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 MRPL37Q9BZE1 423 aaKnown RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 GNG12Q9UBI6 72 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 SLC25A10Q9UBX3 287 aaPredicted RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 FOXD3Q9UJU5 478 aaPredicted RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 URGCP-MRPS24S4R325 110 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 SLC22A20A6NK97 555 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BKO60814 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 IGKV3-11P04433 115 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BJP06899 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BOP23527 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BBP33778 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PTTG1IPP53801 180 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 RBM11P57052 281 aaKnown RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BDP58876 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BCP62807 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST2H2BEQ16778 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 LEMD1Q68G75 181 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BHQ93079 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 APH1AQ96BI3 265 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BNQ99877 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 HIST1H2BMQ99879 126 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 ZPBPQ9BS86 351 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 SPANXDQ9BXN6 97 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PRDM14Q9GZV8 571 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 SAP30LQ9HAJ7 183 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 RAB29O14966 203 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 DLEU1O43261 78 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 ICOSLGO75144 302 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 CT45A10P0DMU9 189 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PPP1CCP36873 323 aaKnown RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 PCP4P48539 62 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 CD226Q15762 336 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 SMIM21Q3B7S5 101 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TMEM196Q5HYL7 178 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PRAMEF5Q5TYX0 476 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PRAMEF6Q5VXH4 476 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 FAM180AQ6UWF9 173 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 LANCL3Q6ZV70 420 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 OR51G1Q8NGK1 321 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 WBP1Q96G27 269 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 MEGF10Q96KG7 1140 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 SNX22Q96L94 193 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 VCX2Q9H322 139 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 LY75O60449 1722 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 MYH10P35580 1976 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 A6NCN8 305 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 H3BML4 177 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 FCN1O00602 326 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 SH2D1BO14796 132 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 FOXS1O43638 330 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 S1PR2O95136 353 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 STATHP02808 62 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 LINC00271P0C7V0 271 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 IGFBP6P24592 240 aaPredicted RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 FOLR3P41439 243 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 CLN3Q13286 438 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PHLDA2Q53GA4 152 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 C9orf135Q5VTT2 229 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 CBLN3Q6UW01 205 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 ERASQ7Z444 233 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 WDFY1Q8IWB7 410 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 NPRL2Q8WTW4 380 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 TAF15Q92804 592 aaKnown RBP eCLIP3.54□□□□□ -1.84
SOX6-217ENST00000533870 TMEM45BQ96B21 275 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 MRPL22Q9NWU5 206 aaKnown RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 MED29Q9NX70 200 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PRNDQ9UKY0 176 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 MRPS18BQ9Y676 258 aaKnown RBP3.54□□□□□ -1.84
SOX6-217ENST00000533870 ATP23Q9Y6H3 246 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 QSER1Q2KHR3 1735 aa3.54□□□□□ -1.84
SOX6-217ENST00000533870 PMS2P1A4D2B8 440 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 C9JCJ5 164 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 C11orf94C9JXX5 98 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 SIGLEC5O15389 551 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 CXorf1O96002 111 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 LINC00869P0C866 280 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 GNB3P16520 340 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 PI3P19957 117 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 Q6AWC8 147 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 ZFP62Q8NB50 900 aaPredicted RBP3.53□□□□□ -1.84
SOX6-217ENST00000533870 OR11L1Q8NGX0 322 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 ISOC2Q96AB3 205 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 NUDT22Q9BRQ3 303 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 TMEM70Q9BUB7 260 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 MRPL13Q9BYD1 178 aaKnown RBP3.53□□□□□ -1.84
SOX6-217ENST00000533870 GSX1Q9H4S2 264 aaPredicted RBP3.53□□□□□ -1.84
SOX6-217ENST00000533870 IL19Q9UHD0 177 aa3.53□□□□□ -1.84
SOX6-217ENST00000533870 TEX50A0A1B0GTY4 177 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms