RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 PLEKHJ1Q9NW61 149 aa9.87□□□□□ -0.83
COMMD9-208ENST00000533643 A8MXK9 166 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 MFNGO00587 321 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 GPR37O15354 613 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 CLPXO76031 633 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 CSN2P05814 226 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 TNFSF8P32971 234 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 GLIPR1P48060 266 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 LCN2P80188 198 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 PAX5Q02548 391 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 RBM39Q14498 530 aaKnown RBP9.86□□□□□ -0.83
COMMD9-208ENST00000533643 EDDM3AQ14507 147 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 ZNF260Q3ZCT1 412 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 RSBN1Q5VWQ0 802 aaPredicted RBP9.86□□□□□ -0.83
COMMD9-208ENST00000533643 CNIH2Q6PI25 160 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 ZNF497Q6ZNH5 498 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 BTN2A1Q7KYR7 527 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 GDPD3Q7L5L3 318 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 OR6Q1Q8NGQ2 317 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 NEK7Q8TDX7 302 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 H1FXQ92522 213 aaKnown RBP9.86□□□□□ -0.83
COMMD9-208ENST00000533643 PHF21AQ96BD5 680 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 AUNIPQ9H7T9 357 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 ZMAT3Q9HA38 289 aaKnown RBP9.86□□□□□ -0.83
COMMD9-208ENST00000533643 ING3Q9NXR8 418 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 ETAA1Q9NY74 926 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 PTTG2Q9NZH5 202 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 AK3Q9UIJ7 227 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 ADAM30Q9UKF2 790 aa9.86□□□□□ -0.83
COMMD9-208ENST00000533643 ELF5Q9UKW6 265 aaPredicted RBP9.86□□□□□ -0.83
COMMD9-208ENST00000533643 ZANQ9Y493 2812 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 LOC105371242A0A075B767 164 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 C22orf46C9J442 243 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 ECDO95905 644 aaPredicted RBP9.85□□□□□ -0.83
COMMD9-208ENST00000533643 MT-ND4P03905 459 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 GSTP1P09211 210 aaKnown RBP9.85□□□□□ -0.83
COMMD9-208ENST00000533643 ERP29P30040 261 aaKnown RBP9.85□□□□□ -0.83
COMMD9-208ENST00000533643 P2RX3P56373 397 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 EDDM3BP56851 147 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 TAS2R20P59543 309 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 PAX2Q02962 417 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 MADCAM1Q13477 382 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 TMEM249Q2WGJ8 235 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 C11orf91Q3C1V1 193 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 KRBOX4Q5JUW0 171 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 TMEM69Q5SWH9 247 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 CD276Q5ZPR3 534 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 SLC35E4Q6ICL7 350 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 SPNS3Q6ZMD2 512 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 GAPTQ8N292 157 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 TPRX1Q8N7U7 411 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 LY6G5BQ8NDX9 201 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 DIRAS2Q96HU8 199 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 WDFY2Q96P53 400 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 DCTN5Q9BTE1 182 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.85□□□□□ -0.83
COMMD9-208ENST00000533643 C19orf12Q9NSK7 152 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 EXTL2Q9UBQ6 330 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 KIF25Q9UIL4 384 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 RPUSD1Q9UJJ7 312 aaKnown RBP9.85□□□□□ -0.83
COMMD9-208ENST00000533643 POLR3KQ9Y2Y1 108 aaPredicted RBP9.85□□□□□ -0.83
COMMD9-208ENST00000533643 MALRD1Q5VYJ5 2156 aa9.85□□□□□ -0.83
COMMD9-208ENST00000533643 FLNAP21333 2647 aaKnown RBP9.85□□□□□ -0.83
COMMD9-208ENST00000533643 MED13LQ71F56 2210 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 CREBBPQ92793 2442 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 TRBV23-1A0A0A0MS06 115 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 TMEM30CPA0ZSE6 113 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 ODAMA1E959 279 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 FUOMA2VDF0 154 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 TMEM235A6NFC5 223 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 B4DSR2 109 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 SMAD7O15105 426 aaKnown RBP9.84□□□□□ -0.83
COMMD9-208ENST00000533643 CA11O75493 328 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 FOXH1O75593 365 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 NAPSAO96009 420 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 HLA-DQB1P01920 261 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 MELTFP08582 738 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 IGHV4-31P0DP07 118 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 PTHLHP12272 177 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 S100A5P33763 92 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 RPL31P62899 125 aaKnown RBP9.84□□□□□ -0.83
COMMD9-208ENST00000533643 MEF2CQ06413 473 aaPredicted RBP9.84□□□□□ -0.83
COMMD9-208ENST00000533643 ARL6IP1Q15041 203 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 TMEM200BQ69YZ2 307 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 C8orf46Q8TAG6 207 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 MRPL30Q8TCC3 161 aaKnown RBP9.84□□□□□ -0.83
COMMD9-208ENST00000533643 DACT3Q96B18 629 aaPredicted RBP9.84□□□□□ -0.83
COMMD9-208ENST00000533643 MSI2Q96DH6 328 aaKnown RBP9.84□□□□□ -0.83
COMMD9-208ENST00000533643 COX4I2Q96KJ9 171 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 SOSTQ9BQB4 213 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 HDHD3Q9BSH5 251 aaPredicted RBP9.84□□□□□ -0.83
COMMD9-208ENST00000533643 NCOR1P1Q9H4R4 102 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 LPAR2Q9HBW0 351 aa9.84□□□□□ -0.83
COMMD9-208ENST00000533643 MRPS7Q9Y2R9 242 aaKnown RBP9.84□□□□□ -0.83
COMMD9-208ENST00000533643 MEIKINA0A087WXM9 373 aa9.83□□□□□ -0.84
COMMD9-208ENST00000533643 TRAV39A0A0B4J263 110 aa9.83□□□□□ -0.84
COMMD9-208ENST00000533643 MEX3AA1L020 520 aaKnown RBP9.83□□□□□ -0.84
COMMD9-208ENST00000533643 SERPINE3A8MV23 424 aa9.83□□□□□ -0.84
COMMD9-208ENST00000533643 CD3GP09693 182 aa9.83□□□□□ -0.84
COMMD9-208ENST00000533643 TALDO1P37837 337 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms