RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CORO2AQ92828 525 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 MEGF9Q9H1U4 602 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 VPREB3Q9UKI3 123 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 SESN1Q9Y6P5 492 aa12.49□□□□□ -0.41
CPSF1-210ENST00000532935 ODF3BA8MYP8 253 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 HSPB6O14558 160 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 NDUFA7O95182 113 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 CSTBP04080 98 aaKnown RBP12.48□□□□□ -0.41
CPSF1-210ENST00000532935 MAS1P04201 325 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 ARG1P05089 322 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 SERPINA2P20848 420 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 MDKP21741 143 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-210ENST00000532935 RAG2P55895 527 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 RELBQ01201 579 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 PAN3Q58A45 887 aaKnown RBP12.48□□□□□ -0.41
CPSF1-210ENST00000532935 NHLRC3Q5JS37 347 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 ZNF626Q68DY1 528 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 GDPGP1Q6ZNW5 385 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 OSR2Q8N2R0 312 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 JAGN1Q8N5M9 183 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 MS4A15Q8N5U1 240 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 OR11H6Q8NGC7 330 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 OR5R1Q8NH85 324 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 PPIL3Q9H2H8 161 aaKnown RBP12.48□□□□□ -0.41
CPSF1-210ENST00000532935 GAL3ST2Q9H3Q3 398 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 ING3Q9NXR8 418 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 TAS2R3Q9NYW6 316 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 ST3GAL6Q9Y274 331 aa12.48□□□□□ -0.41
CPSF1-210ENST00000532935 FAM90A8PA6NJQ4 464 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 H3BUX3 64 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 ZNF780AO75290 641 aaPredicted RBP12.47□□□□□ -0.41
CPSF1-210ENST00000532935 MMP23AO75900 390 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 PAX6P26367 422 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 RBM11P57052 281 aaKnown RBP12.47□□□□□ -0.41
CPSF1-210ENST00000532935 GPR50Q13585 617 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 INSL4Q14641 139 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 LRRC75BQ2VPJ9 315 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 SLC22A6Q4U2R8 563 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 ACSM3Q53FZ2 586 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 UNQ9370/PRO34162Q6UXP9 181 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 LHFPL4Q7Z7J7 247 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 CDH26Q8IXH8 852 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 OR4F5Q8NH21 305 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 MUL1Q969V5 352 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 SSX3Q99909 188 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 ZNF747Q9BV97 191 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 TMED9Q9BVK6 235 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 CCDC90BQ9GZT6 254 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 IFT22Q9H7X7 185 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 PCDHB16Q9NRJ7 776 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 MRPS28Q9Y2Q9 187 aaKnown RBP12.47□□□□□ -0.41
CPSF1-210ENST00000532935 TBL2Q9Y4P3 447 aaKnown RBP12.47□□□□□ -0.41
CPSF1-210ENST00000532935 MMP24Q9Y5R2 645 aa12.47□□□□□ -0.41
CPSF1-210ENST00000532935 IGHV2-26A0A0B4J1V2 119 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 A0A1W2PP11 408 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 POM121CA8CG34 1229 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 GEMIN2O14893 280 aaKnown RBP12.46□□□□□ -0.41
CPSF1-210ENST00000532935 OR7C1O76099 320 aaPredicted RBP12.46□□□□□ -0.41
CPSF1-210ENST00000532935 GTF2F2P13984 249 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 CDK2P24941 298 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 DYNC1I2Q13409 638 aaKnown RBP12.46□□□□□ -0.41
CPSF1-210ENST00000532935 GPR176Q14439 515 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 TBCEQ15813 527 aaPredicted RBP12.46□□□□□ -0.41
CPSF1-210ENST00000532935 AANATQ16613 207 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 PRAMEF5Q5TYX0 476 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 GLIPR1L1Q6UWM5 242 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 HEPN1Q6WQI6 88 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 LINC00596Q86U02 117 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 LYPD6Q86Y78 171 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 NKAIN3Q8N8D7 197 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 UFD1Q92890 307 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 CLEC7AQ9BXN2 247 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 BARHL1Q9BZE3 327 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 RBM38Q9H0Z9 239 aaKnown RBP12.46□□□□□ -0.41
CPSF1-210ENST00000532935 BEX1Q9HBH7 125 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 OR6C3Q9NZP0 311 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 ZNF581Q9P0T4 197 aa12.46□□□□□ -0.41
CPSF1-210ENST00000532935 TRRAPQ9Y4A5 3859 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 A0A1B0GUS0 222 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 KCNJ3P48549 501 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 GP2P55259 537 aaKnown RBP12.45□□□□□ -0.42
CPSF1-210ENST00000532935 EMX1Q04741 257 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-210ENST00000532935 MPV17LQ2QL34 196 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 LDLRAD2Q5SZI1 272 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 FAM27D1Q5T7N8 215 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 SYT6Q5T7P8 510 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-210ENST00000532935 UBE2UQ5VVX9 321 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 RSBN1Q5VWQ0 802 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-210ENST00000532935 LIPKQ5VXJ0 399 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 AWAT2Q6E213 333 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 DHRS7BQ6IAN0 325 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-210ENST00000532935 OR52W1Q6IF63 320 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 BAIAP2L2Q6UXY1 529 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 SUMF2Q8NBJ7 301 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 OR4D6Q8NGJ1 314 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 OR13F1Q8NGS4 319 aa12.45□□□□□ -0.42
CPSF1-210ENST00000532935 FOXRED1Q96CU9 486 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-210ENST00000532935 MALSU1Q96EH3 234 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms