RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ING3Q9NXR8 418 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 ETAA1Q9NY74 926 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 DNAJB11Q9UBS4 358 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 ZNF222Q9UK12 451 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 RAI1Q7Z5J4 1906 aaPredicted RBP18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 TMEM178BH3BS89 294 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 COL8A2P25067 703 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 KRTAP10-9P60411 292 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 ANGPTL6Q8NI99 470 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 ENKURQ8TC29 256 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 NEK7Q8TDX7 302 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 CCL19Q99731 98 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 SHARPINQ9H0F6 387 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 TMEM165Q9HC07 324 aa18.36■□□□□ 0.53
PACSIN3-209ENST00000532457 CSMD2Q7Z408 3487 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 IFNL4K9M1U5 179 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 CSN2P05814 226 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 DTYMKP23919 212 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 OR51S1Q8NGJ8 323 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 MRPL30Q8TCC3 161 aaKnown RBP18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 C12orf4Q9NQ89 552 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 TMEM106BQ9NUM4 274 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 ITPR2Q14571 2701 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 NAP1L6A6NFF2 107 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 H3BUI4 141 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 LY6HO94772 140 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 UPRTQ96BW1 309 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 GLS2Q9UI32 602 aa18.35■□□□□ 0.53
PACSIN3-209ENST00000532457 TRAV39A0A0B4J263 110 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 IGHV1-69-2A0A0G2JMI3 117 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 A0A1B0GW55 424 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 ZNF737O75373 536 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 TCRBP04435 133 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DUX4L2P0CJ85 424 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DUX4L3P0CJ86 424 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DUX4L4P0CJ87 422 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DUX4L5P0CJ88 424 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DUX4L6P0CJ89 424 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DUX4L7P0CJ90 424 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 IRF2P14316 349 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 GABRA2P47869 451 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 OR3A1P47881 315 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 RBM39Q14498 530 aaKnown RBP18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 ATXN7L3Q14CW9 347 aaPredicted RBP18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DUX4L9Q6RFH8 374 aaPredicted RBP18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DEDD2Q8WXF8 326 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 SEBOXQ9HB31 216 aaPredicted RBP18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 DUX4Q9UBX2 424 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 MAB21L2Q9Y586 359 aa18.34■□□□□ 0.53
PACSIN3-209ENST00000532457 SPG11Q96JI7 2443 aa18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 MRPS15P82914 257 aaKnown RBP18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 TEX36Q5VZQ5 186 aa18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 STUMQ69YW2 141 aa18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 ZNF782Q6ZMW2 699 aaPredicted RBP18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 ZNF497Q6ZNH5 498 aa18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 LURAP1Q96LR2 239 aa18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 DPAGT1Q9H3H5 408 aa18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 Q9N2K0 584 aa18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 FLVCR2Q9UPI3 526 aa18.33■□□□□ 0.53
PACSIN3-209ENST00000532457 AKAP6Q13023 2319 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 SDCBPO00560 298 aaPredicted RBP18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 GYPAP02724 150 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 AMY2AP04746 511 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 SELLP14151 372 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 SHEQ5VZ18 495 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 GAPTQ8N292 157 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 ZNRF1Q8ND25 227 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 OR5AP2Q8NGF4 316 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 HPS1Q92902 700 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 LIME1Q9H400 295 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 CHMP1AQ9HD42 196 aaPredicted RBP18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 ANXA10Q9UJ72 324 aa18.33■□□□□ 0.52
PACSIN3-209ENST00000532457 TANC2Q9HCD6 1990 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 OOEPA6NGQ2 149 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 LRRC30A6NM36 301 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 GSTT2P0CG29 244 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 RCC1P18754 421 aaPredicted RBP18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 AESQ08117 197 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 RNASE10Q5GAN6 216 aaKnown RBP18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 ZNF880Q6PDB4 577 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 CCDC107Q8WV48 283 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 NRGNQ92686 78 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 MRGPRFQ96AM1 343 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 COQ2Q96H96 371 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 MARVELD1Q9BSK0 173 aa18.32■□□□□ 0.52
PACSIN3-209ENST00000532457 TRBV6-6A0A0A6YYG2 114 aa18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 PFDN1O60925 122 aa18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 DNASE1P24855 282 aa18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 FAUP35544 74 aaKnown RBP18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 RAB25P57735 213 aa18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 RSBN1Q5VWQ0 802 aaPredicted RBP18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 PLET1Q6UQ28 207 aa18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 CCL13Q99616 98 aa18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 USF3Q68DE3 2245 aa18.31■□□□□ 0.52
PACSIN3-209ENST00000532457 TRAV6A0A075B6T7 132 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 A0A0B4J293 547 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 TNFRSF13BO14836 293 aaPredicted RBP18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 MUC1P15941 1255 aaPredicted RBP18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 CDKN1AP38936 164 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 OVCH2Q7RTZ1 564 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms