RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 DUX5Q96PT3 197 aa11.35□□□□□ -0.59
TSPAN4-220ENST00000532375 BANF2Q9H503 90 aa11.35□□□□□ -0.59
TSPAN4-220ENST00000532375 RCC2Q9P258 522 aaKnown RBP11.35□□□□□ -0.59
TSPAN4-220ENST00000532375 UBE2J1Q9Y385 318 aaPredicted RBP11.35□□□□□ -0.59
TSPAN4-220ENST00000532375 FBN3Q75N90 2809 aa11.35□□□□□ -0.59
TSPAN4-220ENST00000532375 FAM90A8PA6NJQ4 464 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 HOXA3O43365 443 aaPredicted RBP11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 SAA4P35542 130 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 GDNFP39905 211 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 BAMBIQ13145 260 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 ATXN7L3Q14CW9 347 aaPredicted RBP11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 C17orf58Q2M2W7 97 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 MPV17LQ2QL34 196 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 PAN3Q58A45 887 aaKnown RBP11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 SYT6Q5T7P8 510 aaPredicted RBP11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 GLT8D1Q68CQ7 371 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 OR10K2Q6IF99 312 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 BAIAP2L2Q6UXY1 529 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 ZNF782Q6ZMW2 699 aaPredicted RBP11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 LINC00596Q86U02 117 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 LDLRAD3Q86YD5 345 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 OR11H6Q8NGC7 330 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 Q96M66 194 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 S100A13Q99584 98 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 DPCDQ9BVM2 203 aaPredicted RBP11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 HEXA-AS1Q9H8Q6 139 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 LINC00574Q9H8X3 128 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 PCDHB16Q9NRJ7 776 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 TAS2R3Q9NYW6 316 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 GHRLQ9UBU3 117 aa11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 AK6Q9Y3D8 172 aaKnown RBP11.34□□□□□ -0.59
TSPAN4-220ENST00000532375 STAB1Q9NY15 2570 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 FUOMA2VDF0 154 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 TMEM14DPA8MWL7 114 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 ODF3BA8MYP8 253 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 TRIM77I1YAP6 450 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 CCRL2O00421 344 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 HSPB6O14558 160 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 ARL6IP5O75915 188 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 OR7C1O76099 320 aaPredicted RBP11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 RNASE1P07998 156 aaKnown RBP11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 MGMTP16455 207 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 GALP22466 123 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 CALRP27797 417 aaKnown RBP11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 IER3P46695 156 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 KCNJ3P48549 501 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 UNC119Q13432 240 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 MIDNQ504T8 468 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 KRBOX4Q5JUW0 171 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 UTF1Q5T230 341 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 BRICD5Q6PL45 260 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 RBMS3Q6XE24 437 aaKnown RBP11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 GAPTQ8N292 157 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 KCNK15Q9H427 330 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 KIF25Q9UIL4 384 aa11.33□□□□□ -0.6
TSPAN4-220ENST00000532375 TRAV1-2A0A0B4J238 106 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 hCG_1809904A0A1W2PP81 198 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 A0A1W2PR64 198 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 A0A1W2PRV1 198 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 TMEM89A2RUT3 159 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A7PA6NKC0 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 TRIM64CA6NLI5 447 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A22PA8MWA6 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 SLC17A2O00624 439 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 PSMB9P28065 219 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 HTR2CP28335 458 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 FGF9P31371 208 aaPredicted RBP11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 ZNF626Q68DY1 528 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 SLC35E4Q6ICL7 350 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 HEPN1Q6WQI6 88 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 NR2C2APQ86WQ0 139 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 OR6M1Q8NGM8 313 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 OR13A1Q8NGR1 328 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 SELENOIQ9C0D9 397 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 MEGF9Q9H1U4 602 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 ING3Q9NXR8 418 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 ZNRD1Q9P1U0 126 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 SESN1Q9Y6P5 492 aa11.32□□□□□ -0.6
TSPAN4-220ENST00000532375 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
TSPAN4-220ENST00000532375 TRAV39A0A0B4J263 110 aa11.31□□□□□ -0.6
TSPAN4-220ENST00000532375 MEIOCA2RUB1 952 aa11.31□□□□□ -0.6
TSPAN4-220ENST00000532375 NPIPB11E5RHQ5 1161 aa11.31□□□□□ -0.6
TSPAN4-220ENST00000532375 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
TSPAN4-220ENST00000532375 CRTAPO75718 401 aaPredicted RBP11.31□□□□□ -0.6
TSPAN4-220ENST00000532375 CLPXO76031 633 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms