RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 NUP37Q8NFH4 326 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 LRRC20Q8TCA0 184 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 IL22RA2Q969J5 263 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 ELMOD3Q96FG2 381 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 ABHD14BQ96IU4 210 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 KIRREL1Q96J84 757 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 AKR1E2Q96JD6 320 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 WDR13Q9H1Z4 485 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 NCOR1P1Q9H4R4 102 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 NAA60Q9H7X0 242 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 METTL8Q9H825 291 aaKnown RBP10.45□□□□□ -0.74
CHD7-211ENST00000532149 PLSCR3Q9NRY6 295 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 ZDHHC8Q9ULC8 765 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 TMED3Q9Y3Q3 217 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 CEP250Q9BV73 2442 aa10.45□□□□□ -0.74
CHD7-211ENST00000532149 FREM2Q5SZK8 3169 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 KANTRA0A1W2PQU2 76 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 C16orf97H3BN30 126 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 TAAR5O14804 337 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 SYNGR1O43759 233 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 TUSC2O75896 110 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 PPYP01298 95 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 CELA3BP08861 270 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 LYL1P12980 280 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 RPS2P15880 293 aaKnown RBP10.44□□□□□ -0.74
CHD7-211ENST00000532149 GLRA1P23415 457 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 TNFSF4P23510 183 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 KLF3P57682 345 aaPredicted RBP10.44□□□□□ -0.74
CHD7-211ENST00000532149 UBA52P62987 128 aaKnown RBP10.44□□□□□ -0.74
CHD7-211ENST00000532149 ZNF154Q13106 437 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 SMCO1Q147U7 214 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 Q5BKY6 102 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 DMRTC1Q5HYR2 192 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 FAM209AQ5JX71 171 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 CLLU1Q5K131 121 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 ZNF474Q6S9Z5 364 aaPredicted RBP10.44□□□□□ -0.74
CHD7-211ENST00000532149 TMEM108Q6UXF1 575 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 TMUB2Q71RG4 321 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 DOLPP1Q86YN1 238 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 KCNRGQ8N5I3 272 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 CASTOR1Q8WTX7 329 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 PPP1R1CQ8WVI7 109 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 RTN4IP1Q8WWV3 396 aaPredicted RBP10.44□□□□□ -0.74
CHD7-211ENST00000532149 TMEM230Q96A57 120 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 LRRC46Q96FV0 321 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 SPIN2AQ99865 258 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 SPIN2BQ9BPZ2 258 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 VKORC1Q9BQB6 163 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 CABLES2Q9BTV7 478 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 GSX2Q9BZM3 304 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 FGF23Q9GZV9 251 aaPredicted RBP10.44□□□□□ -0.74
CHD7-211ENST00000532149 FN3KRPQ9HA64 309 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 KCNIP1Q9NZI2 227 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 JKAMPQ9P055 326 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 TAAR3PQ9P1P4 343 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 WIPI2Q9Y4P8 454 aa10.44□□□□□ -0.74
CHD7-211ENST00000532149 PTPRZ1P23471 2315 aaPredicted RBP10.44□□□□□ -0.74
CHD7-211ENST00000532149 FXYD6-FXYD2A0A087WZ82 144 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 GPR31O00270 319 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 MPC2O95563 127 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 ZNF44P15621 663 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 PIGPP57054 158 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 SUPT4H1P63272 117 aaKnown RBP10.43□□□□□ -0.74
CHD7-211ENST00000532149 HLA-DRB3P79483 266 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 PAN3Q58A45 887 aaKnown RBP10.43□□□□□ -0.74
CHD7-211ENST00000532149 C6orf183Q5T699 404 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 SLC35E4Q6ICL7 350 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 Q6P435 159 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 ZNF497Q6ZNH5 498 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 ZBTB34Q8NCN2 500 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 OR10J5Q8NHC4 309 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 S100PBPQ96BU1 408 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 ARL6Q9H0F7 186 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 FXYD6Q9H0Q3 95 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 HEXA-AS1Q9H8Q6 139 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 TMEM165Q9HC07 324 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 MBNL3Q9NUK0 354 aaKnown RBP10.43□□□□□ -0.74
CHD7-211ENST00000532149 MED9Q9NWA0 146 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 KIF25Q9UIL4 384 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 TNFSF18Q9UNG2 199 aa10.43□□□□□ -0.74
CHD7-211ENST00000532149 INTS1Q8N201 2190 aaKnown RBP10.43□□□□□ -0.74
CHD7-211ENST00000532149 IGLV3-9A0A075B6K5 115 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 TRAV24A0A0B4J272 114 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 TMEM30CPA0ZSE6 113 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 ARPC5O15511 151 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 CDS2O95674 445 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 SERPINF1P36955 418 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 GATA4P43694 442 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 NKX6-1P78426 367 aaPredicted RBP10.42□□□□□ -0.74
CHD7-211ENST00000532149 SORDQ00796 357 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 SPATA46Q5T0L3 261 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 DCAF12L2Q5VW00 463 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
CHD7-211ENST00000532149 PRSS54Q6PEW0 395 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 TCTEX1D1Q8N7M0 179 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 MRPL30Q8TCC3 161 aaKnown RBP10.42□□□□□ -0.74
CHD7-211ENST00000532149 WDR89Q96FK6 387 aaPredicted RBP10.42□□□□□ -0.74
CHD7-211ENST00000532149 HDHD3Q9BSH5 251 aaPredicted RBP10.42□□□□□ -0.74
CHD7-211ENST00000532149 TOLLIPQ9H0E2 274 aa10.42□□□□□ -0.74
CHD7-211ENST00000532149 SLC2A9Q9NRM0 540 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms