RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SYS1Q8N2H4 156 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 PRSS35Q8N3Z0 413 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 TEX29Q8N6K0 151 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 CCDC54Q8NEL0 328 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR8B3Q8NGG8 313 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR2G2Q8NGZ5 317 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 SUN5Q8TC36 379 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 RPL3LQ92901 407 aaKnown RBP4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 PELI1Q96FA3 418 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF48Q96MX3 618 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR8B2Q96RD0 313 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 SSBP3Q9BWW4 388 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 FGF23Q9GZV9 251 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR51I2Q9H344 312 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 ISG20L2Q9H9L3 353 aaKnown RBP4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 RNF150Q9ULK6 438 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 HSPE1-MOB4S4R3N1 261 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 CSPG4Q6UVK1 2322 aa4.8□□□□□ -1.64
HMGB1P42-201ENST00000532126 IGHV3OR15-7A0A075B7D8 119 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 A0A087X0K7 114 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 LOC107986453A0A1B0GWG9 222 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 PQLC2LA1A4F0 135 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GAGE12BA1L429 117 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 EFCAB10A6NFE3 127 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 A8MXK9 166 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 SRRM5B3KS81 715 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 H0YJX3 145 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 AKR7A2O43488 359 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 XRCC3O43542 346 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GATBO75879 557 aaKnown RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 NDUFB4O95168 129 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GYPAP02724 150 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 ISG15P05161 165 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 CSN3P07498 182 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 RPSAP08865 295 aaKnown RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GNAO1P09471 354 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 OCM2P0CE71 109 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 OCMP0CE72 109 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 LIMS3P0CW19 117 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 LIMS4P0CW20 117 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 RRASP10301 218 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF20P17024 532 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 MYL12AP19105 171 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 BMI1P35226 326 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 NUP62P37198 522 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 KIR3DL2P43630 455 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 HAAOP46952 286 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 NANOS3P60323 173 aaKnown RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GAGE2BQ13066 116 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 MED21Q13503 144 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 IL18Q14116 193 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 KRTAP21-3Q3LHN1 58 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GAGE2EQ4V326 116 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 DMRTC1Q5HYR2 192 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 TEX36Q5VZQ5 186 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 HAGHLQ6PII5 290 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 TMPRSS11AQ6ZMR5 421 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 Q6ZSR3 168 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 PRIMA1Q86XR5 153 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF676Q8N7Q3 588 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 MINDY2Q8NBR6 621 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR10Z1Q8NGY1 313 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 TRMT10AQ8TBZ6 339 aaKnown RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 HAVCR2Q8TDQ0 301 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 PP6455Q8WZ26 134 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 FAM46BQ96A09 425 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 FGGYQ96C11 551 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 C12orf43Q96C57 262 aaKnown RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 C10orf35Q96D05 121 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 TMEM80Q96HE8 168 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 TECTBQ96PL2 329 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 ZNF649Q9BS31 505 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 CHST5Q9GZS9 411 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 VCX3BQ9H321 246 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 FGF20Q9NP95 211 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 MMP26Q9NRE1 261 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 NDUFA13Q9P0J0 144 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 ERVK-18Q9QC07 812 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 CLN8Q9UBY8 286 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 GAGE2DQ9UEU5 116 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 HHLA2Q9UM44 414 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 DIMT1Q9UNQ2 313 aaKnown RBP4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 SLC7A11Q9UPY5 501 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 POLDIP2Q9Y2S7 368 aa4.79□□□□□ -1.64
HMGB1P42-201ENST00000532126 FN1P02751 2386 aaKnown RBP4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 LOC105371242A0A075B767 164 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 HELTA6NFD8 242 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 NKX6-3A6NJ46 265 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 TMEM212A6NML5 194 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 OR4C45A6NMZ5 311 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 TRAPPC2LH3BP13 241 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 J3QT63 122 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 DVL1O14640 695 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 TNFRSF13BO14836 293 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 NDUFB3O43676 98 aa4.78□□□□□ -1.64
HMGB1P42-201ENST00000532126 LANCL1O43813 399 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms