RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 ALKBH1Q13686 389 aaKnown RBP12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 RBM39Q14498 530 aaKnown RBP12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 ATXN7L3Q14CW9 347 aaPredicted RBP12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 KIAA2026Q5HYC2 2103 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 TCTEX1D4Q5JR98 221 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 MYDGFQ969H8 173 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 COQ2Q96H96 371 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 PCDHB16Q9NRJ7 776 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 ING3Q9NXR8 418 aa12.12□□□□□ -0.47
DEPDC7-204ENST00000532078 EI24O14681 340 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 DEGS1O15121 323 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 SULT1B1O43704 296 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 CLIC3O95833 236 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 TMEM225BP0DP42 221 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 DBTP11182 482 aaKnown RBP12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 KHDC1LQ5JSQ8 128 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 Q6P435 159 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 OR5D14Q8NGL3 314 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 RCC1LQ96I51 464 aaKnown RBP12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 FAM53CQ9NYF3 392 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 EXOGQ9Y2C4 368 aaKnown RBP12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 MYRFQ9Y2G1 1151 aa12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 AMMECR1Q9Y4X0 333 aaPredicted RBP12.11□□□□□ -0.47
DEPDC7-204ENST00000532078 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 TMEM238LA0A1B0GVL6 79 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 TMEM212A6NML5 194 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 LY6LH3BQJ8 138 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 AMY1AP04745 511 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 AMY2AP04746 511 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 NFYBP25208 207 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 GLP1RP43220 463 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 MTNR1BP49286 362 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 ZP1P60852 638 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 GALEQ14376 348 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 CDK5R1Q15078 307 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 KISS1Q15726 138 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 C17orf58Q2M2W7 97 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 SERPINA12Q8IW75 414 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 SYS1Q8N2H4 156 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 OR9G1Q8NH87 305 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 PYDC1Q8WXC3 89 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 TOMM40LQ969M1 308 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 RPEQ96AT9 228 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 LGALS12Q96DT0 336 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 KIRREL1Q96J84 757 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 ALG8Q9BVK2 526 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 PPIL3Q9H2H8 161 aaKnown RBP12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 MOB4Q9Y3A3 225 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 HSPE1-MOB4S4R3N1 261 aa12.1□□□□□ -0.47
DEPDC7-204ENST00000532078 H0YJX3 145 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 HSPB6O14558 160 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 DUS4LO95620 317 aaKnown RBP12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 MPIG6BO95866 241 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 FAM106CPP0CH98 169 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 ALDH3A2P51648 485 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 ZIK1Q3SY52 487 aaPredicted RBP12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 PAN3Q58A45 887 aaKnown RBP12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 C9orf152Q5JTZ5 239 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 ZNF691Q5VV52 312 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 OSR2Q8N2R0 312 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 PARP16Q8N5Y8 322 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 ZNF565Q8N9K5 539 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 OR51T1Q8NGJ9 327 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 TSEN15Q8WW01 171 aaKnown RBP12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 CALYQ9NYX4 217 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 DHDHQ9UQ10 334 aa12.09□□□□□ -0.47
DEPDC7-204ENST00000532078 COL7A1Q02388 2944 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 MEIKINA0A087WXM9 373 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 SH2D7A6NKC9 451 aaPredicted RBP12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 E9PQ18 207 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 ZFPL1O95159 310 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 FADS2O95864 444 aaKnown RBP12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 CCDC159P0C7I6 412 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 LPCAT4Q643R3 524 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 ELP2Q6IA86 826 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 LHFPL3Q86UP9 236 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 PXT1Q8NFP0 134 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 OR5AK2Q8NH90 309 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 NCOR1P1Q9H4R4 102 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 INPP5EQ9NRR6 644 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 KIF25Q9UIL4 384 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 GMPPBQ9Y5P6 360 aa12.08□□□□□ -0.48
DEPDC7-204ENST00000532078 PSMB11A5LHX3 300 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 MAGEB3O15480 346 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 IL1AP01583 271 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 SNRNP70P08621 437 aaKnown RBP12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 CGB3P0DN86 165 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 CGB7P0DN87 165 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 RAB3AP20336 220 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 C21orf33P30042 268 aaPredicted RBP12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 KCNJ3P48549 501 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 MADCAM1Q13477 382 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 IL13RA2Q14627 380 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 ZFP1Q6P2D0 407 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 C10orf99Q6UWK7 81 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 THNSL2Q86YJ6 484 aa12.07□□□□□ -0.48
DEPDC7-204ENST00000532078 OR13A1Q8NGR1 328 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms