RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	BRCA1	P38398	1863 aa	Known RBP	4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TRBV5-4	A0A0C4DH59	114 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LCE2B	O14633	110 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SCRG1	O75711	98 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LALBA	P00709	142 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	REN	P00797	406 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PDYN	P01213	254 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	HKR1	P10072	659 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LIF	P15018	202 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CEACAM8	P31997	349 aa	Predicted RBP	4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CD200	P41217	278 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CRYBA2	P53672	197 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RHOB	P62745	196 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MXD1	Q05195	221 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	OPN5	Q6U736	354 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PAMR1	Q6UXH9	720 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	OAF	Q86UD1	273 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF567	Q8N184	647 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MCFD2	Q8NI22	146 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TMEM230	Q96A57	120 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SMARCD1	Q96GM5	515 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PYURF	Q96I23	114 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FAAP24	Q9BTP7	215 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TMPRSS5	Q9H3S3	457 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LIME1	Q9H400	295 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	EXOSC3	Q9NQT5	275 aa	Known RBP	4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	C14orf105	Q9NVL8	296 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	KCNIP1	Q9NZI2	227 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SCP2D1	Q9UJQ7	156 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	NEU3	Q9UQ49	428 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF257	Q9Y2Q1	563 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	AKAP11	Q9UKA4	1901 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PAPPA	Q13219	1627 aa		4.25	□□□□□ -1.73
ECHDC1-222	ENST00000531967	C10orf71	Q711Q0	1435 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	NPIPB9	F8W1W9	429 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TP53I11	O14683	189 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MGST3	O14880	152 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ORC5	O43913	435 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGKV1D-16	P01601	117 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	C1QB	P02746	253 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	REG1A	P05451	166 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	BPGM	P07738	259 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MRPL3	P09001	348 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SDC4	P31431	198 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PFN2	P35080	140 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GPR6	P46095	362 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF133	P52736	654 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SLC18A1	P54219	525 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MFAP2	P55001	183 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SLC10A7	Q0GE19	358 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FASTK	Q14296	549 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SHH	Q15465	462 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF239	Q16600	458 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	VMAC	Q2NL98	169 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CEACAM16	Q2WEN9	425 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967		Q5BKY6	102 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CLLU1	Q5K131	121 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ANKRD22	Q5VYY1	191 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	UBALD2	Q8IYN6	164 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SAMD12	Q8N8I0	201 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	COX18	Q8N8Q8	333 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DEDD2	Q8WXF8	326 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MARVELD1	Q9BSK0	173 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	EFCAB1	Q9HAE3	211 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TAS2R5	Q9NYW4	299 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DNAJC27	Q9NZQ0	273 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	JPT1	Q9UK76	154 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	VDAC3	Q9Y277	283 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DENND4A	Q7Z401	1863 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	KLF18	A0A0U1RQI7	1052 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967		A0A1B0GVT2	93 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SLC17A3	O00476	420 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GGCT	O75223	188 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LYPLA1	O75608	230 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GADD45G	O95257	159 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGHV3-9	P01782	118 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SHBG	P04278	402 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SULT1A3	P0DMM9	295 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SULT1A4	P0DMN0	295 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CD1D	P15813	335 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ERVFC1-1	P60608	527 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	P2RY6	Q15077	328 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ODF3L2	Q3SX64	289 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TMEM78	Q5T7P6	136 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SAMD13	Q5VXD3	122 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF787	Q6DD87	383 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CALHM3	Q86XJ0	350 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF439	Q8NDP4	499 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	OR4M1	Q8NGD0	313 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	OR9Q1	Q8NGQ5	310 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DIRAS2	Q96HU8	199 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF382	Q96SR6	550 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PRSS22	Q9GZN4	317 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	WDR13	Q9H1Z4	485 aa		4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	YLPM1	P49750	1951 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DICER1	Q9UPY3	1922 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TRAV8-4	A0A0B4J246	113 aa		4.23	□□□□□ -1.73

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