RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SH2D1BO14796 132 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 TAAR5O14804 337 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 HMGB3O15347 200 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 GYG2O15488 501 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 RGS16O15492 202 aaPredicted RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 DENND4BO75064 1496 aaPredicted RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 SOX14O95416 240 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 SLC25A27O95847 323 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 CRYGDP07320 174 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 DUX4L2P0CJ85 424 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 DUX4L3P0CJ86 424 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 DUX4L5P0CJ88 424 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 DUX4L6P0CJ89 424 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 DUX4L7P0CJ90 424 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 MPC1LP0DKB6 136 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 TBPP20226 339 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 BDKRB1P46663 353 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 OR10A3P58181 314 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 TCOF1Q13428 1488 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 KLF5Q13887 457 aaPredicted RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 FAM53BQ14153 422 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 EIF2B1Q14232 305 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 RHEBQ15382 184 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 LTC4SQ16873 150 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 SLC25A35Q3KQZ1 300 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 TRMT12Q53H54 448 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 OCIAD2Q56VL3 154 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 C1orf194Q5T5A4 169 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 HENMT1Q5T8I9 393 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 ANKRD22Q5VYY1 191 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 TEX36Q5VZQ5 186 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 TNS3Q68CZ2 1445 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 LAMTOR1Q6IAA8 161 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 AGTRAPQ6RW13 159 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 SCIMPQ6UWF3 145 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 SLC25A48Q6ZT89 311 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 RASSF6Q6ZTQ3 369 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 GLT6D1Q7Z4J2 308 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 VKORC1L1Q8N0U8 176 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 SLC35F6Q8N357 371 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 C9orf62Q8N4C0 152 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 BPIFB2Q8N4F0 458 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 EID2Q8N6I1 236 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 TPRX1Q8N7U7 411 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 ST6GALNAC3Q8NDV1 305 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 ZNF740Q8NDX6 193 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 DUSP18Q8NEJ0 188 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 SLC30A7Q8NEW0 376 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 BEST4Q8NFU0 473 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 OR10G4Q8NGN3 311 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 FBXO25Q8TCJ0 367 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 OR5P2Q8WZ92 322 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 DNAJC30Q96LL9 226 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 SCAF11Q99590 1463 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 TBX5Q99593 518 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 CDX2Q99626 313 aaPredicted RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 C20orf144Q9BQM9 153 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 HSPB9Q9BQS6 159 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 FAAP24Q9BTP7 215 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 ZNF471Q9BX82 626 aaPredicted RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 SUCNR1Q9BXA5 334 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 RSPO3Q9BXY4 272 aaPredicted RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 SPEF2Q9C093 1822 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 MAP1LC3BQ9GZQ8 125 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 CHST5Q9GZS9 411 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 CHRNA10Q9GZZ6 450 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 CXXC4Q9H2H0 198 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 RETNQ9HD89 108 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 FGF20Q9NP95 211 aaPredicted RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 MED9Q9NWA0 146 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 DHCR7Q9UBM7 475 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 DUX4Q9UBX2 424 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 TP53TG1Q9Y2A0 90 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 KLHDC2Q9Y2U9 406 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 EXOSC1Q9Y3B2 195 aaKnown RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 PCYT1BQ9Y5K3 369 aaPredicted RBP2.55□□□□□ -2
PTPRK-220ENST00000531466 HSPE1-MOB4S4R3N1 261 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 V9GYS6 101 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 MEGF6O75095 1541 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 FYCO1Q9BQS8 1478 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 TROQ12816 1431 aaPredicted RBP2.54□□□□□ -2
PTPRK-220ENST00000531466 A0A1W2PP64 1363 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 ASTN1O14525 1302 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 PTPRJQ12913 1337 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 A0A0A6YYD4 124 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 CIB4A0PJX0 185 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 TMEM189A5PLL7 270 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 FAM231BA6NCW3 169 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 DHRS7CA6NNS2 312 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 ZNF724A8MTY0 619 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 G3V4G9 280 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 H3BMH7 237 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 H7C417 338 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 TNFRSF11BO00300 401 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 ZNF593O00488 134 aaPredicted RBP2.54□□□□□ -2
PTPRK-220ENST00000531466 DEGS1O15121 323 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 CLDN11O75508 207 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 CATP04040 527 aaKnown RBP2.54□□□□□ -2
PTPRK-220ENST00000531466 SEMG1P04279 462 aa2.54□□□□□ -2
PTPRK-220ENST00000531466 ARG1P05089 322 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms