RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CYBAP13498 195 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 CTSEP14091 401 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 CTGFP29279 349 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 VIPR2P41587 438 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 NPBWR2P48146 333 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 LCN6P62502 163 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 MSMO1Q15800 293 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 GLIPR1L1Q6UWM5 242 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ERN2Q76MJ5 926 aaKnown RBP7.04□□□□□ -1.28
CSDE1-214ENST00000530886 NECAP1Q8NC96 275 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 CPT1CQ8TCG5 803 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF721Q8TF20 911 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 TM2D1Q9BX74 207 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF665Q9H7R5 613 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 UBE2ZQ9H832 354 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-214ENST00000530886 OR1A2Q9Y585 309 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 LRRC3CA6NJW4 275 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ZFP92A6NM28 416 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 OR1D2P34982 312 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 LHX2P50458 406 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 RAB28P51157 221 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 DYNLT3P51808 116 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 BTN3A2P78410 334 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ARG2P78540 354 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 NHLH1Q02575 133 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ARFRP1Q13795 201 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF726P1Q15940 193 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 SNAI3Q3KNW1 292 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ASCL4Q6XD76 172 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 VN1R4Q7Z5H5 301 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 MUC15Q8N387 334 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 METTL27Q8N6F8 245 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM217Q8N7C4 229 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ZIC4Q8N9L1 334 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 DAZLQ92904 295 aaKnown RBP7.04□□□□□ -1.28
CSDE1-214ENST00000530886 CLUHP3Q96NS8 147 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ST6GALNAC5Q9BVH7 336 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 OR10A2Q9H208 303 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 SOHLH2Q9NX45 425 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 A0A1W2PRS3 328 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 PRSS37A4D1T9 235 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 BNIP3LO60238 219 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 STATHP02808 62 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 GNRHRP30968 328 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 EGR4Q05215 589 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 EXOSC7Q15024 291 aaKnown RBP7.04□□□□□ -1.28
CSDE1-214ENST00000530886 PLPPR5Q32ZL2 321 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 CST9LP1Q5W188 147 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 WBP2NLQ6ICG8 309 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 CRIP3Q6Q6R5 217 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 C17orf78Q8N4C9 275 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 TCTEX1D1Q8N7M0 179 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 OR5D18Q8NGL1 313 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 TM4SF19Q96DZ7 209 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 ADAT3Q96EY9 351 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-214ENST00000530886 SGCZQ96LD1 299 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 SLC46A1Q96NT5 459 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 PECRQ9BY49 303 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 MTIF3Q9H2K0 278 aaKnown RBP7.04□□□□□ -1.28
CSDE1-214ENST00000530886 FAM206AQ9NX38 181 aa7.04□□□□□ -1.28
CSDE1-214ENST00000530886 LSM7Q9UK45 103 aaKnown RBP7.04□□□□□ -1.28
CSDE1-214ENST00000530886 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-214ENST00000530886 LINC01553A4QN01 128 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 CORTO00230 105 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 LATO43561 262 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 IL33O95760 270 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 MPIG6BO95866 241 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 HLA-HP01893 362 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 MSR1P21757 451 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 OTX1P32242 354 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-214ENST00000530886 MEF2BQ02080 365 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-214ENST00000530886 EXT1Q16394 746 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 PRR27Q6MZM9 219 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 FAM71F2Q6NXP2 309 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 FBXO42Q6P3S6 717 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 BATF2Q8N1L9 274 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF709Q8N972 641 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 FLVCR1-AS1Q8TAF5 88 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 ABHD3Q8WU67 409 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 RTN4IP1Q8WWV3 396 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-214ENST00000530886 BCL2L2Q92843 193 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-214ENST00000530886 TXN2Q99757 166 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 SPIN2AQ99865 258 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 SPIN2BQ9BPZ2 258 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 THAP10Q9P2Z0 257 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-214ENST00000530886 TRAPPC6AO75865 159 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 WNT2P09544 360 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 CT62P0C5K7 136 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 ADMP35318 185 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 SERF2P84101 59 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 BHLHA15Q7RTS1 189 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-214ENST00000530886 OR5AS1Q8N127 324 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 NUS1Q96E22 293 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 UHRF2Q96PU4 802 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 LYRM4Q9HD34 91 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 FBXL7Q9UJT9 491 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 P2RY10O00398 339 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 CDIPTO14735 213 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 TOX4O94842 621 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 TTRP02766 147 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms