RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PPIL3Q9H2H8 161 aaKnown RBP11.78□□□□□ -0.52
CAPN1-219ENST00000530495 NCOR1P1Q9H4R4 102 aa11.78□□□□□ -0.52
CAPN1-219ENST00000530495 LINC00574Q9H8X3 128 aa11.78□□□□□ -0.52
CAPN1-219ENST00000530495 ING3Q9NXR8 418 aa11.78□□□□□ -0.52
CAPN1-219ENST00000530495 AMMECR1Q9Y4X0 333 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-219ENST00000530495 A0A1W2PPI3 338 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 NUDT19A8MXV4 375 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 IGHG2P01859 326 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 OCM2P0CE71 109 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 OCMP0CE72 109 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-219ENST00000530495 TMEM11P17152 192 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 POLR2IP36954 125 aaKnown RBP11.77□□□□□ -0.53
CAPN1-219ENST00000530495 GP2P55259 537 aaKnown RBP11.77□□□□□ -0.53
CAPN1-219ENST00000530495 NANOS3P60323 173 aaKnown RBP11.77□□□□□ -0.53
CAPN1-219ENST00000530495 SLC35B1P78383 322 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-219ENST00000530495 ZDHHC13Q8IUH4 622 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 ZNF695Q8IW36 515 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 OR51T1Q8NGJ9 327 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 OR5D18Q8NGL1 313 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 OR8J1Q8NGP2 316 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 TFAP2CQ92754 450 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 RFKQ969G6 155 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 EME1Q96AY2 570 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 SPACA5Q96QH8 159 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 GABARAPL1Q9H0R8 117 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 LSM4Q9Y4Z0 139 aaKnown RBP11.77□□□□□ -0.53
CAPN1-219ENST00000530495 U3KQK5 164 aa11.77□□□□□ -0.53
CAPN1-219ENST00000530495 DNAH9Q9NYC9 4486 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 RAB7AP51149 207 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 CCR9P51686 369 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 BNIP1Q12981 228 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 MADCAM1Q13477 382 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 DIAPH2-AS1Q14236 149 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 HES1Q14469 280 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 HNF4GQ14541 408 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 SLC16A12Q6ZSM3 486 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 OR8H3Q8N146 312 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 HAVCR2Q8TDQ0 301 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 SLC7A6OSQ96CW6 309 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-219ENST00000530495 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 CIB1Q99828 191 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 OSBPL10Q9BXB5 764 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 NEK6Q9HC98 313 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 IDI2-AS1Q9NZ38 188 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 LINC00527Q9UJ94 153 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 PSG11Q9UQ72 335 aa11.76□□□□□ -0.53
CAPN1-219ENST00000530495 LINC01548A6NM66 108 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 NPIPB11E5RHQ5 1161 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 CCL24O00175 119 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 IGHV3-7P01780 117 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 TMEM225BP0DP42 221 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 DBTP11182 482 aaKnown RBP11.75□□□□□ -0.53
CAPN1-219ENST00000530495 C21orf33P30042 268 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-219ENST00000530495 EBI3Q14213 229 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 SLC35E3Q7Z769 313 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 FOXRED2Q8IWF2 684 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 STPG2Q8N412 459 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 OR51A4Q8NGJ6 313 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 OR13A1Q8NGR1 328 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 OR13C3Q8NGS6 347 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 OR13C9Q8NGT0 318 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 OR10AC1Q8NH08 325 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 DUX3Q96PT4 197 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 BARHL1Q9BZE3 327 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 ZCCHC4Q9H5U6 513 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 CALYQ9NYX4 217 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 KIF25Q9UIL4 384 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
CAPN1-219ENST00000530495 MEIKINA0A087WXM9 373 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 H0YJX3 145 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 J3QRE1 110 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 ZFPL1O95159 310 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 IGKV1D-33P01593 117 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 IGKV1-33P01594 117 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 FASP25445 335 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 MTNR1BP49286 362 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 ZP1P60852 638 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 KISS1Q15726 138 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 NKAPLQ5M9Q1 402 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 ELP2Q6IA86 826 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 GABARAPL3Q9BY60 117 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 DCLRE1BQ9H816 532 aa11.74□□□□□ -0.53
CAPN1-219ENST00000530495 TRAV24A0A0B4J272 114 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 DAPL1A0PJW8 107 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 OR4C45A6NMZ5 311 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 SLC16A6O15403 523 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 IL1AP01583 271 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 HTR1AP08908 422 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 GLP1RP43220 463 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 PAX5Q02548 391 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 KIR2DS1Q14954 304 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 PNLIPRP3Q17RR3 467 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 PAN3Q58A45 887 aaKnown RBP11.73□□□□□ -0.53
CAPN1-219ENST00000530495 AMIGO2Q86SJ2 522 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 SERPINA12Q8IW75 414 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 OR5D14Q8NGL3 314 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms