RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 CD8AP01732 235 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 IMPA1P29218 277 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 VSNL1P62760 191 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 IHHQ14623 411 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 CEACAM16Q2WEN9 425 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 FAHD1Q6P587 224 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 USP50Q70EL3 339 aaPredicted RBP2.85□□□□□ -1.95
CASP4-208ENST00000530309 CD302Q8IX05 232 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 LGALS14Q8TCE9 139 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 SLC35B4Q969S0 331 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 DUSP21Q9H596 190 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 IQGAP3Q86VI3 1631 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 CRYBG1Q9Y4K1 1723 aa2.85□□□□□ -1.95
CASP4-208ENST00000530309 ATP7BP35670 1465 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 VWDEQ8N2E2 1590 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 BAZ2AQ9UIF9 1905 aaKnown RBP2.84□□□□□ -1.95
CASP4-208ENST00000530309 K7EPK0 472 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 STX10O60499 249 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 SC5DO75845 299 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 PAEPP09466 180 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 XIAPP98170 497 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 LIN9Q5TKA1 542 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 ZNF660Q6AZW8 331 aaPredicted RBP2.84□□□□□ -1.95
CASP4-208ENST00000530309 LINC00596Q86U02 117 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 CYP4Z1Q86W10 505 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 FXYD5Q96DB9 178 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 GLT1D1Q96MS3 346 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 YPEL4Q96NS1 127 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 PAIP2Q9BPZ3 127 aaKnown RBP2.84□□□□□ -1.95
CASP4-208ENST00000530309 COPS4Q9BT78 406 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 ASF1BQ9NVP2 202 aa2.84□□□□□ -1.95
CASP4-208ENST00000530309 NPATQ14207 1427 aa2.84□□□□□ -1.96
CASP4-208ENST00000530309 TRPM2O94759 1503 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 ATP7AQ04656 1500 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 LRRC7Q96NW7 1537 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 SAMD9LQ8IVG5 1584 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 CEP152O94986 1710 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 IGKV1OR2-108A0A075B7D4 117 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 C15orf65H3BRN8 121 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 DNASE1L1P49184 302 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 XKP51811 444 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 KLF3P57682 345 aaPredicted RBP2.83□□□□□ -1.96
CASP4-208ENST00000530309 DSTNP60981 165 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 STX4Q12846 297 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 ENDOGQ14249 297 aaKnown RBP2.83□□□□□ -1.96
CASP4-208ENST00000530309 GUSBP1Q15486 140 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 WHAMMP3Q1A5X7 153 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 ACTL10Q5JWF8 245 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 UBE2NLQ5JXB2 153 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 RESP18Q5W5W9 173 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 PAGE2Q7Z2X7 111 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 FAM19A1Q7Z5A9 133 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 ZNF396Q96N95 335 aaPredicted RBP2.83□□□□□ -1.96
CASP4-208ENST00000530309 CIB1Q99828 191 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 UPF3BQ9BZI7 483 aaKnown RBP2.83□□□□□ -1.96
CASP4-208ENST00000530309 NXF2Q9GZY0 626 aaKnown RBP2.83□□□□□ -1.96
CASP4-208ENST00000530309 DNAJC27Q9NZQ0 273 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 ZNF706Q9Y5V0 76 aaPredicted RBP2.83□□□□□ -1.96
CASP4-208ENST00000530309 SYNRGQ9UMZ2 1314 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 ZFYVE9O95405 1425 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 NSD3Q9BZ95 1437 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 RIMS2Q9UQ26 1411 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 BCL9LQ86UU0 1499 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 DLC1Q96QB1 1528 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 ABCA8O94911 1581 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 SETBP1Q9Y6X0 1596 aa2.83□□□□□ -1.96
CASP4-208ENST00000530309 C2orf16Q68DN1 1984 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 SHROOM3Q8TF72 1996 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 H3BQ85 93 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 ENSAO43768 121 aaKnown RBP2.82□□□□□ -1.96
CASP4-208ENST00000530309 ENTPD6O75354 484 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 ZMPSTE24O75844 475 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 FAM107AO95990 144 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 PTHLHP12272 177 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 IDO1P14902 403 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 CCNOP22674 350 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 Q499Y3 187 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 TTMPQ5BVD1 217 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 FAM173BQ6P4H8 233 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 MMGT1Q8N4V1 131 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 OR8S1Q8NH09 359 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 C15orf41Q9Y2V0 281 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 CARHSP1Q9Y2V2 147 aaKnown RBP2.82□□□□□ -1.96
CASP4-208ENST00000530309 TRAPPC1Q9Y5R8 145 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 GMEB1Q9Y692 573 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 EVC2Q86UK5 1308 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 ARHGEF10O15013 1369 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 TMEM94Q12767 1356 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 ERCC6L2Q5T890 1561 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 ZCCHC11Q5TAX3 1644 aaKnown RBP2.82□□□□□ -1.96
CASP4-208ENST00000530309 ABCA9Q8IUA7 1624 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 MYO5CQ9NQX4 1742 aa2.82□□□□□ -1.96
CASP4-208ENST00000530309 HIVEP2P31629 2446 aa2.81□□□□□ -1.96
CASP4-208ENST00000530309 SIGLEC16A6NMB1 481 aa2.81□□□□□ -1.96
CASP4-208ENST00000530309 GOLGA8KD6RF30 607 aa2.81□□□□□ -1.96
CASP4-208ENST00000530309 F8VZ95 297 aa2.81□□□□□ -1.96
CASP4-208ENST00000530309 NDUFS8O00217 210 aa2.81□□□□□ -1.96
CASP4-208ENST00000530309 ISLRO14498 428 aa2.81□□□□□ -1.96
CASP4-208ENST00000530309 GYG2O15488 501 aa2.81□□□□□ -1.96
CASP4-208ENST00000530309 TRAPPC3O43617 180 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms