RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	APLNR	P35414	380 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	ECI1	P42126	302 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	HTR5A	P47898	357 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	TMEM50B	P56557	158 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	HABP2	Q14520	560 aa	Predicted RBP	12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	PPA1	Q15181	289 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	RNF212	Q495C1	297 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	TMEM200A	Q86VY9	491 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	FAM89B	Q8N5H3	189 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	BHLHE23	Q8NDY6	225 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	LYPD6B	Q8NI32	183 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	SSC4D	Q8WTU2	575 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	ITLN2	Q8WWU7	325 aa	Predicted RBP	12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	EMG1	Q92979	244 aa	Known RBP	12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	OR10C1	Q96KK4	312 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	URM1	Q9BTM9	101 aa	Known RBP	12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	TMEM59	Q9BXS4	323 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	TAF9B	Q9HBM6	251 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	KPTN	Q9Y664	436 aa		12.51	□□□□□ -0.41
NR1H3-231	ENST00000529540	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	MED6	O75586	246 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	HKR1	P10072	659 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	NFYB	P25208	207 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	DVL1P1	P54792	670 aa	Predicted RBP	12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	F2RL1	P55085	397 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	TBC1D28	Q2M2D7	210 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	AADACL3	Q5VUY0	350 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	RPL7L1	Q6DKI1	246 aa	Known RBP	12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZNF774	Q6NX45	483 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	MDP1	Q86V88	176 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	COMMD1	Q8N668	190 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	WDR31	Q8NA23	367 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	TMEM104	Q8NE00	496 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	OR51F2	Q8NH61	342 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	WNT5B	Q9H1J7	359 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	METTL8	Q9H825	291 aa	Known RBP	12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	SLC25A15	Q9Y619	301 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540	FAM208B	Q5VWN6	2430 aa		12.5	□□□□□ -0.41
NR1H3-231	ENST00000529540		J3QW42	95 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZG16	O60844	167 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	PTAFR	P25105	342 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	OTX1	P32242	354 aa	Predicted RBP	12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	OR3A4P	P47883	348 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	SWI5	Q1ZZU3	235 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	OR51E1	Q8TCB6	317 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	OR2S2	Q9NQN1	319 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	GHRL	Q9UBU3	117 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZFYVE26	Q68DK2	2539 aa		12.49	□□□□□ -0.41
NR1H3-231	ENST00000529540		M0R135	149 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	EIF3G	O75821	320 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ACAA1	P09110	424 aa	Predicted RBP	12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	PATE4	P0C8F1	98 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	PRF1	P14222	555 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	CRYGS	P22914	178 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	CCKAR	P32238	428 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	PTGFR	P43088	359 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ALDH3B1	P43353	468 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	FAM76B	Q5HYJ3	339 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	RNF144B	Q7Z419	303 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	LURAP1L	Q8IV03	231 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	C1orf174	Q8IYL3	243 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	AKR7L	Q8NHP1	331 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	FGFBP3	Q8TAT2	258 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZNF799	Q96GE5	643 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ARHGAP5-AS1	Q96IT6	56 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	KIRREL1	Q96J84	757 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	OR10A2	Q9H208	303 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	TUBA4B	Q9H853	241 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	CACFD1	Q9UGQ2	172 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	MYO7B	Q6PIF6	2116 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	NKX2-6	A6NCS4	301 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	C1orf196	B1AJZ1	125 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	UBE2C	O00762	179 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	JTB	O76095	146 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	IGLV1-44	P01699	117 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZNF14	P17017	642 aa	Predicted RBP	12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	PMEL	P40967	661 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	UCP2	P55851	309 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	FAM3A	P98173	230 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ARL6IP1	Q15041	203 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	DOK3	Q7L591	496 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZNF283	Q8N7M2	679 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	OR8B12	Q8NGG6	310 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	CPNE2	Q96FN4	548 aa	Predicted RBP	12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	SULT4A1	Q9BR01	284 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ARV1	Q9H2C2	271 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	C1orf123	Q9NWV4	160 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZNF391	Q9UJN7	358 aa		12.48	□□□□□ -0.41
NR1H3-231	ENST00000529540	ZNF503-AS2	A6NEH8	195 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	C5orf52	A6NGY3	159 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540		F5H5K5	113 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	AGFG2	O95081	481 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	RCC1	P18754	421 aa	Predicted RBP	12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	IDH3G	P51553	393 aa	Predicted RBP	12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	S100A10	P60903	97 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	ARFRP1	Q13795	201 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	RBM39	Q14498	530 aa	Known RBP	12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	KRTAP27-1	Q3LI81	207 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	DHRS11	Q6UWP2	260 aa		12.47	□□□□□ -0.41
NR1H3-231	ENST00000529540	CPEB3	Q8NE35	698 aa	Known RBP	12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms