RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ZNF488Q96MN9 340 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 OR8B2Q96RD0 313 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 KIAA1217Q5T5P2 1943 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 RGS13O14921 159 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 PTBP3O95758 552 aaKnown RBP7.13□□□□□ -1.27
CTNND1-220ENST00000529526 ARG1P05089 322 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 KLHDC1Q8N7A1 406 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 IL22RA2Q969J5 263 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 FAM210BQ96KR6 192 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 TMEM38BQ9NVV0 291 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 LPAR3Q9UBY5 353 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 MRPS18BQ9Y676 258 aaKnown RBP7.13□□□□□ -1.27
CTNND1-220ENST00000529526 IGHV3-21A0A0B4J1V1 117 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 C5orf67F2Z3F1 127 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 MS4A18H0YCH9 400 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 DAOP14920 347 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 BMI1P35226 326 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 RPL13AP40429 203 aaKnown RBP7.13□□□□□ -1.27
CTNND1-220ENST00000529526 P2RY1P47900 373 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 MS4A18Q3C1V0 323 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 SMRP1Q8NCR6 262 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 OR10A7Q8NGE5 316 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 PRSS3P2Q8NHM4 247 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 ZNF385AQ96PM9 386 aaKnown RBP7.13□□□□□ -1.27
CTNND1-220ENST00000529526 SAP30LQ9HAJ7 183 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 NTMQ9P121 344 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 UFC1Q9Y3C8 167 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 MCM3APO60318 1980 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 IGKV3-7A0A075B6H7 116 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 BMPR1BO00238 502 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 SYNGR2O43760 224 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 IGHV4-34P06331 123 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 OR5AL1P0C617 328 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 AESQ08117 197 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 MPV17LQ2QL34 196 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 OR4P4Q8NGL7 312 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 MRGPRFQ96AM1 343 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 GLRX2Q9NS18 164 aa7.13□□□□□ -1.27
CTNND1-220ENST00000529526 NKX2-6A6NCS4 301 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 OR4C45A6NMZ5 311 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 PPYP01298 95 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 SCGB1C2P0DMR2 95 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 GABRA1P14867 456 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 IL24Q13007 206 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 LYZL2Q7Z4W2 148 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 MDP1Q86V88 176 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 OR4D10Q8NGI6 311 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 HMSDA8MTL9 139 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 CSN3P07498 182 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 RNF224P0DH78 156 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 GZMMP51124 257 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 HLA-DRB3P79483 266 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 TMEM91Q6ZNR0 172 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 PDPNQ86YL7 162 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 TGIF2LYQ8IUE0 185 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 SLC22A18ASQ8N1D0 253 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 DTD1Q8TEA8 209 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 RND1Q92730 232 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 ISOC2Q96AB3 205 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
CTNND1-220ENST00000529526 ZNF764Q96H86 408 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-220ENST00000529526 RNF2Q99496 336 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 CES1P1Q9UKY3 287 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 PSG2P11465 335 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 CEACAM3P40198 252 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 ACAA2P42765 397 aaKnown RBP7.12□□□□□ -1.27
CTNND1-220ENST00000529526 KLF9Q13886 244 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-220ENST00000529526 PSG5Q15238 335 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 RAB1CQ92928 201 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 SCMH1Q96GD3 660 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 TTTY12Q9BZ98 90 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 DCAF16Q9NXF7 216 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 KLK13Q9UKR3 277 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 PCOLCE2Q9UKZ9 415 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 HTN1P15515 57 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 REG1BP48304 166 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 APOBEC4Q8WW27 367 aaKnown RBP7.12□□□□□ -1.27
CTNND1-220ENST00000529526 ZNF426Q9BUY5 554 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 LPAR2Q9HBW0 351 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 VSIG4Q9Y279 399 aa7.12□□□□□ -1.27
CTNND1-220ENST00000529526 TRAV20A0A0B4J274 112 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 HLA-GP17693 338 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 RPS4Y1P22090 263 aaKnown RBP7.11□□□□□ -1.27
CTNND1-220ENST00000529526 RANP62826 216 aaKnown RBP7.11□□□□□ -1.27
CTNND1-220ENST00000529526 ATP6V1FQ16864 119 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 AWAT1Q58HT5 328 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 SLC25A42Q86VD7 318 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 OR52L2PQ8NGH6 319 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 RNF7Q9UBF6 113 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 ST6GALNAC2Q9UJ37 374 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 RGPD4Q7Z3J3 1758 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 LEUTXA8MZ59 168 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 C11orf94C9JXX5 98 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 CRHP06850 196 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 IRF3Q14653 427 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 ANGPTL6Q8NI99 470 aa7.11□□□□□ -1.27
CTNND1-220ENST00000529526 TMEM208Q9BTX3 173 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms