RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 MRPL21Q7Z2W9 205 aaKnown RBP2.39□□□□□ -2.03
CTR9-204ENST00000529355 LYG2Q86SG7 212 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 CRLF3Q8IUI8 442 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 C4orf33Q8N1A6 199 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 PXT1Q8NFP0 134 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 OR4K5Q8NGD3 323 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 KCNG3Q8TAE7 436 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 ZFAND1Q8TCF1 268 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 PIFOQ8TCI5 191 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 CA5BP1Q8WTZ4 195 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 CACNG8Q8WXS5 425 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 RGP1Q92546 391 aaPredicted RBP2.39□□□□□ -2.03
CTR9-204ENST00000529355 SLC38A4Q969I6 547 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 PPWD1Q96BP3 646 aaKnown RBP2.39□□□□□ -2.03
CTR9-204ENST00000529355 CNBD2Q96M20 576 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 COL21A1Q96P44 957 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 PANX1Q96RD7 426 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 HBEGFQ99075 208 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 OSBPL11Q9BXB4 747 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 ULBP2Q9BZM5 246 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 ANKRA2Q9H9E1 313 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 EFCAB1Q9HAE3 211 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 ZNF160Q9HCG1 818 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 HRASLSQ9HDD0 168 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 TMEM9BQ9NQ34 198 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 SAR1AQ9NR31 198 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 TUBG2Q9NRH3 451 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 C1orf109Q9NX04 203 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 SLC2A8Q9NY64 477 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 MTCH1Q9NZJ7 389 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 ADA2Q9NZK5 511 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 MED11Q9P086 117 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 GSKIPQ9P0R6 139 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 RWDD2AQ9UIY3 292 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 SAR1BQ9Y6B6 198 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 URGCP-MRPS24S4R325 110 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 OVOS2A0A0G2JMS6 1433 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 OVOS2A0A0J9YW53 1432 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 BLMP54132 1417 aaPredicted RBP2.39□□□□□ -2.03
CTR9-204ENST00000529355 OVOS2Q6IE36 1432 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 SSH2Q76I76 1423 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 ZNF638Q14966 1978 aaKnown RBP2.39□□□□□ -2.03
CTR9-204ENST00000529355 ADAMTS12P58397 1594 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 GRIN2BQ13224 1484 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 TEX14Q8IWB6 1497 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 MLH3Q9UHC1 1453 aa2.39□□□□□ -2.03
CTR9-204ENST00000529355 SYCP2Q9BX26 1530 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 KDM5AP29375 1690 aaKnown RBP2.38□□□□□ -2.03
CTR9-204ENST00000529355 ZC3H13Q5T200 1668 aaKnown RBP2.38□□□□□ -2.03
CTR9-204ENST00000529355 TRAV40A0A0B4J280 105 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 H3BN98 237 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 MRASO14807 208 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 SLC16A4O15374 487 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 CHST10O43529 356 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 PLCH2O75038 1416 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 UGT2B11O75310 529 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 RCBTB2O95199 551 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 ZFYVE9O95405 1425 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 IFNA7P01567 189 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 IFNA5P01569 189 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 APCSP02743 223 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 EIF4EP06730 217 aaKnown RBP2.38□□□□□ -2.03
CTR9-204ENST00000529355 CRYGBP07316 175 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 PET100P0DJ07 73 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 C1GALT1C1LP0DN25 315 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 BGNP21810 368 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 BCKDHBP21953 392 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 DDTP30046 118 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 S100A11P31949 105 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 CX3CR1P49238 355 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 RAB5CP51148 216 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 ADARB1P78563 741 aaKnown RBP2.38□□□□□ -2.03
CTR9-204ENST00000529355 RPL19P84098 196 aaKnown RBP2.38□□□□□ -2.03
CTR9-204ENST00000529355 GTF2BQ00403 316 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 EMX2Q04743 252 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 BTN1A1Q13410 526 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 RAB31Q13636 194 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 TAF1AQ15573 450 aaPredicted RBP2.38□□□□□ -2.03
CTR9-204ENST00000529355 ZNF726P1Q15940 193 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 PSMD5Q16401 504 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 ZNF181Q2M3W8 571 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 TRMT5Q32P41 509 aaKnown RBP2.38□□□□□ -2.03
CTR9-204ENST00000529355 SLC36A2Q495M3 483 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 XKR7Q5GH72 579 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 SPIN3Q5JUX0 258 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 CLLU1Q5K131 121 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 C9orf84Q5VXU9 1444 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 FAM45BPQ6NSW5 357 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 REEP3Q6NUK4 255 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 DCUN1D2Q6PH85 259 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 TMEM107Q6UX40 140 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 IZUMO2Q6UXV1 221 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 FGD6Q6ZV73 1430 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 SUPT6HQ7KZ85 1726 aaKnown RBP2.38□□□□□ -2.03
CTR9-204ENST00000529355 DENND4AQ7Z401 1863 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 GRINAQ7Z429 371 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 ARPINQ7Z6K5 226 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 GALNT10Q86SR1 603 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 CALHM1Q8IU99 346 aa2.38□□□□□ -2.03
CTR9-204ENST00000529355 NALCNQ8IZF0 1738 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms