RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 GPR27Q9NS67 375 aa12.68□□□□□ -0.38
CAPN1-214ENST00000528165 PCDH15Q96QU1 1955 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 IGKV1-27A0A075B6S5 117 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 MMP9P14780 707 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 MSX1P28360 303 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 APLNRP35414 380 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 COL10A1Q03692 680 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 ZFP36L1Q07352 338 aaKnown RBP12.67□□□□□ -0.38
CAPN1-214ENST00000528165 ENDOGQ14249 297 aaKnown RBP12.67□□□□□ -0.38
CAPN1-214ENST00000528165 RSPO1Q2MKA7 263 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-214ENST00000528165 SNAI3Q3KNW1 292 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 OSR2Q8N2R0 312 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 SPTSSAQ969W0 71 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 PLEK2Q9NYT0 353 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 XKRY2A2RUG3 117 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 CCDC85CA6NKD9 419 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 GCGP01275 180 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 CA3P07451 260 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 GNRHRP30968 328 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 CCR5P51681 352 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 ID3Q02535 119 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 MALLQ13021 153 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 CLN3Q13286 438 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 OR2AE1Q8NHA4 323 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 ZNF442Q9H7R0 627 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 DCAF16Q9NXF7 216 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 ST3GAL6Q9Y274 331 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 MTCH2Q9Y6C9 303 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 RALGAPA1Q6GYQ0 2036 aa12.67□□□□□ -0.38
CAPN1-214ENST00000528165 SPAG17Q6Q759 2223 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 OR8B8Q15620 311 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 EXT1Q16394 746 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 LCN15Q6UWW0 184 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 METTL7AQ9H8H3 244 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 A0A1B0GX78 115 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 AQP7P3A6NL99 342 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 EREGO14944 169 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 TUBG1P23258 451 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 OTX1P32242 354 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-214ENST00000528165 PDCD1Q15116 288 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 NKAIN1Q4KMZ8 207 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 SIGLEC12Q96PQ1 595 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 HIST1H2AAQ96QV6 131 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 A0A1B0GWJ7 208 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 PDCD6O75340 191 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 HLA-HP01893 362 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 VDAC1P21796 283 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 SHBQ15464 509 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 WDR5BQ86VZ2 330 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 CA5BP1Q8WTZ4 195 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 RPRMQ9NS64 109 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 SLC7A10Q9NS82 523 aa12.66□□□□□ -0.38
CAPN1-214ENST00000528165 TCN2P20062 427 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 ADIRFQ15847 76 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 NMSQ5H8A3 153 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 TMEM211Q6ICI0 200 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 LHFPL2Q6ZUX7 228 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 SLC25A26Q70HW3 274 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 OR2V1Q8NHB1 315 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 NAT6Q93015 286 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 P2RX4Q99571 388 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 RBM24Q9BX46 236 aaKnown RBP12.65□□□□□ -0.38
CAPN1-214ENST00000528165 LAMP3Q9UQV4 416 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 IGKV1-12A0A0C4DH73 117 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 DUXBA0A1W2PPF3 345 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 CLEC18AA5D8T8 446 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 CEBPZOSA8MTT3 80 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 IL18BPO95998 194 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 IGKV1D-12P01611 117 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 DRD1P21728 446 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 FGF8P55075 233 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-214ENST00000528165 PRSS12P56730 875 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 MRPS34P82930 218 aaKnown RBP12.65□□□□□ -0.38
CAPN1-214ENST00000528165 TNFRSF9Q07011 255 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 CLEC18CQ8NCF0 446 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 SCGB1C1Q8TD33 95 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 RBM14Q96PK6 669 aaKnown RBP12.65□□□□□ -0.38
CAPN1-214ENST00000528165 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 P4HTMQ9NXG6 502 aa12.65□□□□□ -0.38
CAPN1-214ENST00000528165 VCANP13611 3396 aa12.65□□□□□ -0.39
CAPN1-214ENST00000528165 H3BP45 60 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 CD55P08174 381 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 COA6Q5JTJ3 125 aaKnown RBP12.64□□□□□ -0.39
CAPN1-214ENST00000528165 PHYHD1Q5SRE7 291 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 WDR25Q64LD2 544 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-214ENST00000528165 ABLIM2Q6H8Q1 611 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 ASCL4Q6XD76 172 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 ZNF66Q6ZN08 573 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 Q6ZPA2 131 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 GPHA2Q96T91 129 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 RSG1Q9BU20 258 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 TPSD1Q9BZJ3 242 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 VAX2Q9UIW0 290 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 MED12Q93074 2177 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 TRBV11-1A0A0K0K1C0 115 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 PPP5D1E7EU14 171 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 TK1P04183 234 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 DEFB133Q30KQ1 61 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms