RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 DPM3Q9P2X0 92 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 ZNF281Q9Y2X9 895 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 A0A087X0M5 115 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 TRAV39A0A0B4J263 110 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 KBTBD11-OT1A0A1B0GTJ5 212 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 A0A1B0GX30 115 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 FUOMA2VDF0 154 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 MAGEA13PA6NCF6 341 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 F2RL2O00254 374 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 HTR3BO95264 441 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 GNAO1P09471 354 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 CSF1P09603 554 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 PTGFRP43088 359 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 RCN1Q15293 331 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 C2orf68Q2NKX9 166 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 TMEM95Q3KNT9 176 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 RSBN1Q5VWQ0 802 aaPredicted RBP8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 TTC23Q5W5X9 447 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 C11orf88Q6PI97 169 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 TMPRSS11AQ6ZMR5 421 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 RTN4RL2Q86UN3 420 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 DHRSXQ8N5I4 330 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 PACRGLQ8N7B6 248 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 GHSRQ92847 366 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 TMEM106AQ96A25 262 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 SMIM19Q96E16 107 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 TMEM80Q96HE8 168 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 PGLYRP3Q96LB9 341 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 GPER1Q99527 375 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 OCSTAMPQ9BR26 566 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 WNT10AQ9GZT5 417 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 KIF25Q9UIL4 384 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 ING4Q9UNL4 249 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 EXOSC1Q9Y3B2 195 aaKnown RBP8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 PCDHGB5Q9Y5G0 923 aa8.36□□□□□ -1.07
PRPF40B-204ENST00000527253 TRAV8-7A0A075B6U6 113 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 A0A1W2PP11 408 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 IRGMA1A4Y4 181 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 ZNF729A6NN14 1252 aaPredicted RBP8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 ADARB2-AS1A8MUL3 147 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 ANKRD65E5RJM6 399 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 BUB1B-PAK6H3BSN5 160 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 MAGEB3O15480 346 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 XPNPEP2O43895 674 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 GPX5O75715 221 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 IGHV3-7P01780 117 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 ST3GAL4Q11206 333 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 IL13RA2Q14627 380 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 RSU1Q15404 277 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 HLA-DRB5Q30154 266 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 PAN3Q58A45 887 aaKnown RBP8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 TPTE2P1Q5T6R2 138 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 OGFRL1Q5TC84 451 aaPredicted RBP8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 OR52W1Q6IF63 320 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 SUMF2Q8NBJ7 301 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 OR52N1Q8NH53 320 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 FBLIM1Q8WUP2 373 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 LEAP2Q969E1 77 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 KIRREL1Q96J84 757 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 CYYR1Q96J86 154 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 OR5M11Q96RB7 305 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 PRSS22Q9GZN4 317 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 FAM192AQ9GZU8 254 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 NCOR1P1Q9H4R4 102 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 LINC00574Q9H8X3 128 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 TMEM138Q9NPI0 162 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 CALYQ9NYX4 217 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 PITPNC1Q9UKF7 332 aa8.35□□□□□ -1.07
PRPF40B-204ENST00000527253 MEIKINA0A087WXM9 373 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 TRBV5-7A0A0A0MS05 114 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 A0A1W2PPK0 400 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 SH2D7A6NKC9 451 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 LEUTXA8MZ59 168 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 NPIPB11E5RHQ5 1161 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 PIN1P1O15428 100 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 PLXNB1O43157 2135 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 AMY1AP04745 511 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 AMY2AP04746 511 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 CD2P06729 351 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 MYL12AP19105 171 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 NFYBP25208 207 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 C21orf33P30042 268 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 BDKRB2P30411 391 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 ZNF93P35789 620 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 CAPGP40121 348 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 GLP1RP43220 463 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 PAX5Q02548 391 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 DIAPH2-AS1Q14236 149 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 NHLRC3Q5JS37 347 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 DDI2Q5TDH0 399 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 FAM53AQ6NSI3 398 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 SETD9Q8NE22 299 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 OR4D6Q8NGJ1 314 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 RFESDQ8TAC1 157 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 ZNF596Q8TC21 504 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 MRGPRDQ8TDS7 321 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 DPCDQ9BVM2 203 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 METTL9Q9H1A3 318 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 IFT22Q9H7X7 185 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 C8orf4Q9NR00 106 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms