RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 HAVCR1Q96D42 359 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 SMIM19Q96E16 107 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 REEP6Q96HR9 211 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 OR2J1Q9GZK6 312 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 SRD5A3Q9H8P0 318 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 MOB1AQ9H8S9 216 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 GPR84Q9NQS5 396 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 NUFIP1Q9UHK0 495 aaKnown RBP3.74□□□□□ -1.81
USP48-211ENST00000526044 ZNF391Q9UJN7 358 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 HHLA2Q9UM44 414 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 TCF19Q9Y242 345 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 RNF115Q9Y4L5 304 aa3.74□□□□□ -1.81
USP48-211ENST00000526044 RTTNQ86VV8 2226 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 A0A1B0GTI1 187 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 FAM230AA0A1W2PPH8 454 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 LOC390937A0A1W2PQ73 354 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 A6NIN4 97 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 ANKRD30BLA7E2S9 258 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 CD300LBA8K4G0 201 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 SHISA9B4DS77 424 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 E7EQL1 145 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 H3BSA7 217 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 H3BSH0 61 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 TRIM77I1YAP6 450 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 DHRS3O75911 302 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 IGLV3-1P01715 115 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 IGHV3-13P01766 116 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 IGHV4-39P01824 125 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 HLA-DPB1P04440 258 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 CD2P06729 351 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 PRSS1P07477 247 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 OR4A8P0C604 315 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 STAG3L3P0CL85 134 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 SMIM18P0DKX4 95 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 ZNF250P15622 560 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 SELEP16581 610 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 CD36P16671 472 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 ANXA7P20073 488 aaKnown RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 PSMA1P25786 263 aaKnown RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 LOXP28300 417 aaPredicted RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 ALDH3B2P48448 385 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 EVX1P49640 407 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 KLF3P57682 345 aaPredicted RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 ERVS71-1P61550 626 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 SPOCK1Q08629 439 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 PSG7Q13046 419 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 PDZK1IP1Q13113 114 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 GK2Q14410 553 aaPredicted RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 Q499Y3 187 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 OR2T2Q6IF00 324 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 UNQ9370/PRO34162Q6UXP9 181 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 FBXW12Q6X9E4 464 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 Q6ZSR3 168 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 RFPL4BQ6ZWI9 263 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 Q75L30 129 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 GPR141Q7Z602 305 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 CEACAM19Q7Z692 300 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 RTN4RL2Q86UN3 420 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 FTMTQ8N4E7 242 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 KBTBD8Q8NFY9 601 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 OR52B4Q8NGK2 314 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 OR13C3Q8NGS6 347 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 RPS4Y2Q8TD47 263 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 GPR148Q8TDV2 347 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 PIGCQ92535 297 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 FGGYQ96C11 551 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 C10orf35Q96D05 121 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 C14orf79Q96F83 325 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 FAM71F1Q96KD3 344 aaPredicted RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 OPALINQ96PE5 141 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 GAL3ST1Q99999 423 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 DHRS9Q9BPW9 319 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 PDCD1LG2Q9BQ51 273 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 TMED9Q9BVK6 235 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 PPIL3Q9H2H8 161 aaKnown RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 MMP27Q9H306 513 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 ZNF442Q9H7R0 627 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 CA10Q9NS85 328 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 ZNF275Q9NSD4 429 aaPredicted RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 TMEM100Q9NV29 134 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 TAAR3PQ9P1P4 343 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 MDFICQ9P1T7 246 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 PURGQ9UJV8 347 aaKnown RBP3.73□□□□□ -1.81
USP48-211ENST00000526044 FZR1Q9UM11 496 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 SSR3Q9UNL2 185 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 GSTK1Q9Y2Q3 226 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 V9GYS6 101 aa3.73□□□□□ -1.81
USP48-211ENST00000526044 HIVEP3Q5T1R4 2406 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 PRR14LQ5THK1 2151 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 TRBV5-5A0A0J9YX44 114 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 hCG_38984A0A1B0GV85 526 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 TRDV1A0A1B0GX56 115 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 A0A1W2PPK0 400 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 A0A1W2PPW3 197 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 ANKRD61A6NGH8 418 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 DHRS7CA6NNS2 312 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 C15orf62A8K5M9 175 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 IQCF6A8MYZ5 107 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 ZNF879B4DU55 563 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 CTDSPLO15194 276 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms